Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SNORD74.4-201ENST00000364129 80 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 RPS27AP11-201ENST00000402798 447 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 SNORA11F-201ENST00000408237 128 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.41□□□□□ -1.7
HACD3Q9P035 TMSB10P2-201ENST00000416049 131 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AC004552.1-201ENST00000419089 348 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.41□□□□□ -1.7
HACD3Q9P035 RPS27AP7-201ENST00000422792 455 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.41□□□□□ -1.7
HACD3Q9P035 DPY19L1P2-201ENST00000426647 915 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.41□□□□□ -1.7
HACD3Q9P035 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.41□□□□□ -1.7
HACD3Q9P035 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.41□□□□□ -1.7
HACD3Q9P035 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.41□□□□□ -1.7
HACD3Q9P035 snoU13.1-201ENST00000459157 104 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 RPL32P14-201ENST00000463196 378 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 RPS26P3-201ENST00000470205 348 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.41□□□□□ -1.7
HACD3Q9P035 AC090543.2-201ENST00000483963 348 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AC004057.1-201ENST00000485827 348 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 RN7SL810P-201ENST00000493031 276 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.41□□□□□ -1.7
HACD3Q9P035 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.41□□□□□ -1.7
HACD3Q9P035 AC093720.1-201ENST00000505681 714 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.41□□□□□ -1.7
HACD3Q9P035 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.41□□□□□ -1.7
HACD3Q9P035 AC121161.1-201ENST00000510606 652 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AC133963.2-201ENST00000513686 578 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 RNU6-1004P-201ENST00000516584 111 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AP003102.1-201ENST00000525638 661 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.41□□□□□ -1.7
HACD3Q9P035 CR383656.6-201ENST00000550518 394 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HACD3Q9P035 MIR4715-201ENST00000584117 79 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.41□□□□□ -1.7
HACD3Q9P035 MTATP6P2-201ENST00000603319 678 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AL160290.3-201ENST00000604869 165 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AC090948.1-201ENST00000607464 549 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 MIR6820-201ENST00000611508 62 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 uc_338.13-201ENST00000618243 179 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AP000943.4-201ENST00000622912 357 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AC068880.4-201ENST00000623082 495 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 NOL8P1-201ENST00000508336 3529 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HACD3Q9P035 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HACD3Q9P035 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HACD3Q9P035 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HACD3Q9P035 AC025031.4-201ENST00000621248 3271 ntBASIC4.4□□□□□ -1.7
HACD3Q9P035 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HACD3Q9P035 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
HACD3Q9P035 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HACD3Q9P035 MTND5P11-201ENST00000511037 1812 ntBASIC4.4□□□□□ -1.7
HACD3Q9P035 MIR16-2-201ENST00000362117 81 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HACD3Q9P035 RNU6-1005P-201ENST00000384519 107 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 AL035405.1-201ENST00000400795 710 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.4□□□□□ -1.71
HACD3Q9P035 SNRPFP1-201ENST00000414761 252 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.4□□□□□ -1.71
HACD3Q9P035 EIF1P3-201ENST00000423841 334 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.4□□□□□ -1.71
HACD3Q9P035 MTCO3P21-201ENST00000430791 643 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.4□□□□□ -1.71
HACD3Q9P035 GSTA7P-201ENST00000438425 448 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.4□□□□□ -1.71
HACD3Q9P035 RPS27P5-201ENST00000444247 244 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.4□□□□□ -1.71
HACD3Q9P035 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.4□□□□□ -1.71
HACD3Q9P035 Z95152.1-201ENST00000453556 656 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 RN7SL738P-201ENST00000470264 297 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 RPL23AP2-201ENST00000471227 466 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 AC005912.1-201ENST00000495392 255 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 AC010627.1-201ENST00000503819 1294 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HACD3Q9P035 ATP1B1P1-201ENST00000509767 915 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 AC112198.4-201ENST00000515450 351 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 SNORA31.13-201ENST00000516624 135 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.4□□□□□ -1.71
HACD3Q9P035 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.4□□□□□ -1.71
HACD3Q9P035 IGLVIV-53-201ENST00000520107 367 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 IGLV3-26-201ENST00000520756 302 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.4□□□□□ -1.71
HACD3Q9P035 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.4□□□□□ -1.71
HACD3Q9P035 AC104229.1-201ENST00000561364 255 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.4□□□□□ -1.71
HACD3Q9P035 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.4□□□□□ -1.71
HACD3Q9P035 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.4□□□□□ -1.71
HACD3Q9P035 MIR4330-201ENST00000579077 105 ntBASIC4.4□□□□□ -1.71
HACD3Q9P035 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms