Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MTND2P25-201ENST00000449028 610 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 HMGB1P5-202ENST00000451497 985 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 RNA5SP49-201ENST00000516450 115 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 OR8R1P-201ENST00000543943 764 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 RN7SL600P-201ENST00000581811 299 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 HMGB2P1-201ENST00000591146 634 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 AC123768.4-201ENST00000616244 701 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 HPVC1-201ENST00000629899 1198 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 MTND4P21-201ENST00000453886 1357 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 MIR921-201ENST00000401133 56 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AC048351.1-201ENST00000420064 602 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 FAR1P1-201ENST00000427163 934 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 BTF3P10-201ENST00000433415 495 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 RNU7-27P-201ENST00000459281 62 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 RNU6-1004P-201ENST00000516584 111 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 CKS1BP1-201ENST00000555221 240 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AL049870.4-201ENST00000555741 486 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AC027176.2-201ENST00000559166 746 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 NPM1P47-201ENST00000560843 856 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AC022884.3-201ENST00000579571 248 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AC040174.2-201ENST00000602701 465 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AL354984.3-201ENST00000604803 325 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AL392048.1-201ENST00000613946 534 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AC025016.1-201ENST00000616746 682 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 NXPH1-205ENST00000602349 1953 ntBASIC4.49□□□□□ -1.69
HPS4Q9NQG7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.49□□□□□ -1.69
HPS4Q9NQG7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 ASNSP1-204ENST00000641977 1664 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 SNORA48.7-201ENST00000391302 135 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 AC097374.1-203ENST00000400783 485 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 PPIAP31-201ENST00000405422 495 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 RPL36AP36-201ENST00000418616 301 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 Z74021.1-201ENST00000423610 407 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 AL138785.1-201ENST00000425821 331 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 AC010683.1-201ENST00000473673 378 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 AC107398.1-201ENST00000486904 505 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 RPS27AP13-201ENST00000498403 237 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 AC098799.1-201ENST00000504752 800 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 ATP1B1P1-201ENST00000509767 915 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 RNU6-347P-201ENST00000516658 105 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 OR5BC1P-201ENST00000529327 739 ntBASIC4.48□□□□□ -1.69
HPS4Q9NQG7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HPS4Q9NQG7 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms