Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PCDH9Q9HC56 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 CPHL1P-201ENST00000461341 3407 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 RNA5SP397-201ENST00000391323 118 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 SDHCP2-201ENST00000398565 501 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 MIR937-201ENST00000401271 86 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 SNORA74C-2-201ENST00000411179 201 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC019050.1-201ENST00000418508 492 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 EIF4EP1-201ENST00000422311 642 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AL591719.1-201ENST00000444669 744 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 CEACAMP6-201ENST00000452007 574 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC113420.1-201ENST00000507903 571 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 PGBD4P4-201ENST00000509673 613 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 RNU6-1004P-201ENST00000516584 111 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC134698.5-201ENST00000519444 336 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 LRRC6P1-201ENST00000532188 885 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AP006289.1-201ENST00000538089 277 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC063949.1-201ENST00000552900 865 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 MTND6P33-201ENST00000571794 183 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AL121834.1-201ENST00000572284 509 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 SS18L2P2-201ENST00000583960 235 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC068790.7-201ENST00000602347 528 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC106052.1-201ENST00000608029 497 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 PART1_2.1-201ENST00000612397 250 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC024023.1-201ENST00000624530 922 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 BMS1P21-201ENST00000634565 365 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AC091046.3-201ENST00000631455 1574 ntBASIC4.64□□□□□ -1.67
PCDH9Q9HC56 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDH9Q9HC56 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AC021146.4-201ENST00000309229 279 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 RNA5SP307-201ENST00000362863 116 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 SNORA70F-201ENST00000384142 135 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 RPS27AP11-201ENST00000402798 447 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 HMGB3P31-201ENST00000413333 595 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 LIPT1P1-201ENST00000415870 1186 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AL590139.1-201ENST00000416267 400 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 USP9YP21-201ENST00000420603 432 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 OR6K4P-201ENST00000423179 955 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 RPS26P47-201ENST00000427219 348 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 DYNLL1P7-201ENST00000429273 258 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 USP9YP24-201ENST00000434374 697 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms