Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RPS15AP29-201ENST00000445539 400 ntBASIC6.19□□□□□ -1.42
IFT140Q96RY7 AC093663.1-201ENST00000497190 394 ntBASIC6.19□□□□□ -1.42
IFT140Q96RY7 STMN1P2-201ENST00000508435 439 ntBASIC6.19□□□□□ -1.42
IFT140Q96RY7 AC138938.1-201ENST00000515431 782 ntBASIC6.19□□□□□ -1.42
IFT140Q96RY7 MIR5004-201ENST00000579078 107 ntBASIC6.19□□□□□ -1.42
IFT140Q96RY7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.19□□□□□ -1.42
IFT140Q96RY7 AC107294.1-201ENST00000609524 467 ntBASIC6.19□□□□□ -1.42
IFT140Q96RY7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.19□□□□□ -1.42
IFT140Q96RY7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.19□□□□□ -1.42
IFT140Q96RY7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
IFT140Q96RY7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
IFT140Q96RY7 THAP12P5-201ENST00000405864 2275 ntBASIC6.18□□□□□ -1.42
IFT140Q96RY7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
IFT140Q96RY7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
IFT140Q96RY7 AC067945.1-201ENST00000342609 618 ntBASIC6.18□□□□□ -1.42
IFT140Q96RY7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
IFT140Q96RY7 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.18□□□□□ -1.42
IFT140Q96RY7 RPL26P28-201ENST00000451325 435 ntBASIC6.18□□□□□ -1.42
IFT140Q96RY7 LSM3P2-201ENST00000551246 273 ntBASIC6.18□□□□□ -1.42
IFT140Q96RY7 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.18□□□□□ -1.42
IFT140Q96RY7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.18□□□□□ -1.42
IFT140Q96RY7 AC002069.2-201ENST00000603580 883 ntBASIC6.18□□□□□ -1.42
IFT140Q96RY7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.18□□□□□ -1.42
IFT140Q96RY7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
IFT140Q96RY7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC6.18□□□□□ -1.42
IFT140Q96RY7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.18□□□□□ -1.42
IFT140Q96RY7 HSPD1P11-201ENST00000508643 1702 ntBASIC6.18□□□□□ -1.42
IFT140Q96RY7 AC112198.2-201ENST00000426589 6996 ntBASIC6.18□□□□□ -1.42
IFT140Q96RY7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
IFT140Q96RY7 LINC01109-201ENST00000603837 3081 ntBASIC6.18□□□□□ -1.42
IFT140Q96RY7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
IFT140Q96RY7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
IFT140Q96RY7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
IFT140Q96RY7 SETP9-201ENST00000423837 832 ntBASIC6.17□□□□□ -1.42
IFT140Q96RY7 RNF19BPX-201ENST00000426224 625 ntBASIC6.17□□□□□ -1.42
IFT140Q96RY7 AC084198.1-201ENST00000477747 402 ntBASIC6.17□□□□□ -1.42
IFT140Q96RY7 AC096576.1-201ENST00000489014 359 ntBASIC6.17□□□□□ -1.42
IFT140Q96RY7 RNA5SP208-201ENST00000516156 78 ntBASIC6.17□□□□□ -1.42
IFT140Q96RY7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
IFT140Q96RY7 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
IFT140Q96RY7 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.17□□□□□ -1.42
IFT140Q96RY7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
IFT140Q96RY7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
IFT140Q96RY7 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
IFT140Q96RY7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
IFT140Q96RY7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
IFT140Q96RY7 AL672167.1-203ENST00000641299 2975 ntBASIC6.16□□□□□ -1.42
IFT140Q96RY7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
IFT140Q96RY7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.16□□□□□ -1.42
IFT140Q96RY7 BMS1P3-201ENST00000372011 932 ntBASIC6.16□□□□□ -1.42
IFT140Q96RY7 TAF9BP1-201ENST00000396646 746 ntBASIC6.16□□□□□ -1.42
IFT140Q96RY7 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.16□□□□□ -1.42
IFT140Q96RY7 RPF2P1-201ENST00000424137 906 ntBASIC6.16□□□□□ -1.42
IFT140Q96RY7 AL591473.1-201ENST00000464297 313 ntBASIC6.16□□□□□ -1.42
IFT140Q96RY7 AC037198.2-201ENST00000478845 733 ntBASIC6.16□□□□□ -1.42
IFT140Q96RY7 AC008694.2-201ENST00000517591 306 ntBASIC6.16□□□□□ -1.42
IFT140Q96RY7 IGHV3-32-201ENST00000519182 355 ntBASIC6.16□□□□□ -1.42
IFT140Q96RY7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.16□□□□□ -1.42
IFT140Q96RY7 AC011611.1-201ENST00000552179 197 ntBASIC6.16□□□□□ -1.42
IFT140Q96RY7 LARP7P3-201ENST00000579888 337 ntBASIC6.16□□□□□ -1.42
IFT140Q96RY7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
IFT140Q96RY7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
IFT140Q96RY7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
IFT140Q96RY7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
IFT140Q96RY7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
IFT140Q96RY7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
IFT140Q96RY7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
IFT140Q96RY7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.16□□□□□ -1.42
IFT140Q96RY7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
IFT140Q96RY7 RNU1-15P-201ENST00000353977 144 ntBASIC6.15□□□□□ -1.42
IFT140Q96RY7 DBIP2-201ENST00000419076 262 ntBASIC6.15□□□□□ -1.42
IFT140Q96RY7 AC117434.1-201ENST00000419971 836 ntBASIC6.15□□□□□ -1.42
IFT140Q96RY7 KATNBL1P2-201ENST00000433311 835 ntBASIC6.15□□□□□ -1.42
IFT140Q96RY7 RPL12P46-201ENST00000436610 195 ntBASIC6.15□□□□□ -1.42
IFT140Q96RY7 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.15□□□□□ -1.42
IFT140Q96RY7 SNORA71B-202ENST00000439232 272 ntBASIC6.15□□□□□ -1.42
IFT140Q96RY7 AL671855.1-201ENST00000446875 1203 ntBASIC6.15□□□□□ -1.42
IFT140Q96RY7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.15□□□□□ -1.42
IFT140Q96RY7 TMED11P-201ENST00000479478 690 ntBASIC6.15□□□□□ -1.42
IFT140Q96RY7 AC026782.2-201ENST00000510845 636 ntBASIC6.15□□□□□ -1.42
IFT140Q96RY7 AC100770.1-201ENST00000532310 322 ntBASIC6.15□□□□□ -1.42
IFT140Q96RY7 AC006116.10-201ENST00000591836 581 ntBASIC6.15□□□□□ -1.42
IFT140Q96RY7 SMCR2_2.1-201ENST00000619783 161 ntBASIC6.15□□□□□ -1.42
IFT140Q96RY7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
IFT140Q96RY7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
IFT140Q96RY7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
IFT140Q96RY7 AL121839.2-201ENST00000565058 6943 ntBASIC6.15□□□□□ -1.43
IFT140Q96RY7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
IFT140Q96RY7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.15□□□□□ -1.43
IFT140Q96RY7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.15□□□□□ -1.43
IFT140Q96RY7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC6.15□□□□□ -1.43
IFT140Q96RY7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC6.15□□□□□ -1.43
IFT140Q96RY7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.15□□□□□ -1.43
IFT140Q96RY7 MIR7851-201ENST00000610611 160 ntBASIC6.15□□□□□ -1.43
IFT140Q96RY7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
IFT140Q96RY7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
IFT140Q96RY7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
IFT140Q96RY7 AC008079.2-201ENST00000623543 20396 ntBASIC6.14□□□□□ -1.43
IFT140Q96RY7 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.14□□□□□ -1.43
IFT140Q96RY7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms