Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 RNU1-89P-201ENST00000384592 164 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 ATP5F1P4-201ENST00000397288 746 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 RPS24P12-201ENST00000402084 394 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AL590704.1-201ENST00000402856 794 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AL445189.1-201ENST00000405722 338 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 RN7SKP159-201ENST00000410657 292 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 HMGB3P20-201ENST00000417997 600 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 RPS6P2-201ENST00000454208 705 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AC091544.1-201ENST00000484702 348 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AC005798.1-201ENST00000513715 387 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AL133457.1-201ENST00000564251 987 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AC093227.2-201ENST00000589357 285 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AL020997.2-201ENST00000602607 184 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 RNU1-30P-201ENST00000606575 163 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 AP000553.6-201ENST00000641242 118 ntBASIC3.09□□□□□ -1.91
GAFA1Q96PS6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.09□□□□□ -1.91
GAFA1Q96PS6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.09□□□□□ -1.92
GAFA1Q96PS6 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
GAFA1Q96PS6 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.09□□□□□ -1.92
GAFA1Q96PS6 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.09□□□□□ -1.92
GAFA1Q96PS6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 RPL7P60-201ENST00000397636 735 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 ZNF603P-201ENST00000405613 487 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 RN7SKP56-201ENST00000410513 331 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AL691447.1-201ENST00000419456 387 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 RPL17P36-201ENST00000420302 549 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AL158073.1-201ENST00000426848 1104 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AC092017.2-201ENST00000427600 362 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AL445584.1-201ENST00000431451 330 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 NDUFB1P1-201ENST00000435191 180 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 NOTCH2P1-201ENST00000443481 624 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AC099563.1-201ENST00000456086 418 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AC022034.3-201ENST00000471393 478 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 UBE2CP3-201ENST00000502715 450 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AL121766.1-201ENST00000547436 487 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AC244505.7-201ENST00000599675 272 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AL049634.3-201ENST00000604968 457 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.08□□□□□ -1.92
GAFA1Q96PS6 TTC39DP-201ENST00000416781 1688 ntBASIC3.08□□□□□ -1.92
GAFA1Q96PS6 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
GAFA1Q96PS6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
GAFA1Q96PS6 CASC19-284ENST00000642142 1868 ntBASIC3.07□□□□□ -1.92
GAFA1Q96PS6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
GAFA1Q96PS6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
GAFA1Q96PS6 RNU1-18P-201ENST00000363062 164 ntBASIC3.07□□□□□ -1.92
GAFA1Q96PS6 RNA5SP322-201ENST00000363617 119 ntBASIC3.07□□□□□ -1.92
GAFA1Q96PS6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
GAFA1Q96PS6 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
GAFA1Q96PS6 AC007066.1-201ENST00000392902 381 ntBASIC3.07□□□□□ -1.92
GAFA1Q96PS6 AC025750.1-201ENST00000399891 379 ntBASIC3.07□□□□□ -1.92
GAFA1Q96PS6 RN7SKP202-201ENST00000410439 330 ntBASIC3.07□□□□□ -1.92
GAFA1Q96PS6 AC096644.3-201ENST00000416788 338 ntBASIC3.07□□□□□ -1.92
GAFA1Q96PS6 RPL21P109-201ENST00000422213 475 ntBASIC3.07□□□□□ -1.92
GAFA1Q96PS6 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
GAFA1Q96PS6 KCTD10P1-201ENST00000434203 625 ntBASIC3.07□□□□□ -1.92
GAFA1Q96PS6 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.07□□□□□ -1.92
GAFA1Q96PS6 AL645931.1-201ENST00000439737 410 ntBASIC3.07□□□□□ -1.92
GAFA1Q96PS6 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
GAFA1Q96PS6 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.07□□□□□ -1.92
GAFA1Q96PS6 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
GAFA1Q96PS6 RN7SL93P-201ENST00000463035 293 ntBASIC3.07□□□□□ -1.92
GAFA1Q96PS6 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
GAFA1Q96PS6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.07□□□□□ -1.92
GAFA1Q96PS6 HMGB3P13-201ENST00000511263 607 ntBASIC3.07□□□□□ -1.92
GAFA1Q96PS6 RN7SKP83-201ENST00000516512 178 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms