Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 FAM91A3P-201ENST00000456826 2544 ntBASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 OR4A15-201ENST00000314706 1035 ntBASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 Y_RNA.500-201ENST00000384466 111 ntBASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 SEPT7P2-202ENST00000398921 823 ntBASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 AC010740.1-201ENST00000417035 684 ntBASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 RPL6P21-201ENST00000418672 846 ntBASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 GAPDHP36-201ENST00000480688 918 ntBASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 AL360157.1-201ENST00000565962 87 ntBASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 AC025627.2-201ENST00000576220 160 ntBASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 AC090912.3-201ENST00000609775 533 ntBASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 UBE3AP2-201ENST00000429033 2259 ntBASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AC007068.1-201ENST00000396690 844 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 RPL23AP71-201ENST00000470966 469 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 RNU1-103P-201ENST00000516502 125 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 RNU1-30P-201ENST00000606575 163 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 Z82217.1-201ENST00000625157 8149 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 IPO8P1-201ENST00000455509 3109 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 RNU6-213P-201ENST00000384051 104 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AL160275.2-201ENST00000412010 394 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 KCTD9P3-201ENST00000434597 1169 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 HMGB3P22-202ENST00000451823 572 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AC104849.1-201ENST00000462623 405 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AC109458.1-201ENST00000508858 316 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AC005412.1-201ENST00000580812 1049 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AC015726.1-201ENST00000602353 681 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AC128687.2-201ENST00000609657 566 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 MIR6868-201ENST00000611215 58 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 AC016542.2-201ENST00000624201 619 ntBASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.98□□□□□ -1.77
SHROOM3Q8TF72 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 AC024560.2-201ENST00000507981 1497 ntBASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 CASC19-284ENST00000642142 1868 ntBASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 RNU6-1279P-201ENST00000383917 103 ntBASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 MIR93-201ENST00000385024 80 ntBASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 AC104306.1-201ENST00000449702 371 ntBASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 AC010460.1-201ENST00000507087 466 ntBASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 RN7SKP289-201ENST00000517244 295 ntBASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 AL133457.1-201ENST00000564251 987 ntBASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 FP236240.3-201ENST00000623061 327 ntBASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 AL034408.1-202ENST00000636088 415 ntBASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms