Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC005261.4-201ENST00000600047 1385 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC107068.1-201ENST00000563286 4218 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 RNU4-92P-201ENST00000363783 136 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 SNORA51.12-201ENST00000384448 134 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 TAS2R15P-201ENST00000390674 928 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 GLULP6-201ENST00000399502 913 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AL079342.2-201ENST00000403367 482 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 GSTM3P2-201ENST00000412746 530 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 MTCO2P21-201ENST00000419780 677 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AL009174.1-201ENST00000426577 416 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 RAC1P8-201ENST00000427086 527 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC092162.1-201ENST00000432828 434 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AL359265.2-201ENST00000434367 631 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 NANOGP2-201ENST00000435391 727 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC016831.4-201ENST00000438302 307 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 UBE2V1P5-201ENST00000440070 405 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 NAP1L1P3-201ENST00000462291 880 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC112206.1-201ENST00000468416 477 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 RN7SL860P-201ENST00000473738 223 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC104971.1-201ENST00000495117 578 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 OR51K1P-201ENST00000510214 950 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC112673.1-201ENST00000513168 575 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 RNU2-30P-201ENST00000516209 141 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 RNU6-416P-201ENST00000516265 103 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 RNU6-347P-201ENST00000516658 105 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 MTND4P33-201ENST00000556706 766 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 MTND4LP24-201ENST00000572277 291 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC068790.7-201ENST00000602347 528 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC068790.4-201ENST00000602474 263 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AL020997.3-201ENST00000602843 359 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AL121932.1-201ENST00000605542 214 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC099676.1-201ENST00000608886 657 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AL445423.1-201ENST00000609941 536 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 AC079395.3-201ENST00000615161 484 ntBASIC4.43□□□□□ -1.7
BEST3Q8N1M1 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BEST3Q8N1M1 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC000367.1-201ENST00000452711 1766 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC022031.1-201ENST00000585985 2593 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 RNA5SP332-201ENST00000391063 115 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 MTCO2P31-201ENST00000402702 684 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 HMGB1P49-201ENST00000418882 569 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 DNAJC19P7-201ENST00000428811 344 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 RPL7P4-203ENST00000430239 730 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 RPS17P8-201ENST00000434525 335 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 RHEBP2-201ENST00000450289 600 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 RPL37P3-201ENST00000456825 293 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 CYCSP34-201ENST00000458172 304 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC005410.1-202ENST00000460347 485 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 RPL7AP10-201ENST00000481016 791 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 CEACAMP10-202ENST00000495431 496 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 RN7SL558P-201ENST00000497468 299 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms