Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC2.59□□□□□ -2
CSMD3Q7Z407 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSMD3Q7Z407 OR10J6P-201ENST00000289731 930 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 RPS23P10-201ENST00000416185 486 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CSMD3Q7Z407 AC008065.1-201ENST00000428525 348 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 AC091862.1-201ENST00000438016 1100 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSMD3Q7Z407 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.58□□□□□ -2
CSMD3Q7Z407 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC2.58□□□□□ -2
CSMD3Q7Z407 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 EIF5A2P1-201ENST00000564027 460 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 RPL12P50-201ENST00000603116 116 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC2.58□□□□□ -2
CSMD3Q7Z407 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CSMD3Q7Z407 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSMD3Q7Z407 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSMD3Q7Z407 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CSMD3Q7Z407 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSMD3Q7Z407 SAMMSON-213ENST00000641336 1521 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CSMD3Q7Z407 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC2.58□□□□□ -2
CSMD3Q7Z407 BMS1P3-201ENST00000372011 932 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 HMGB3P9-201ENST00000441799 583 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.58□□□□□ -2
CSMD3Q7Z407 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.58□□□□□ -2
CSMD3Q7Z407 RNA5SP164-201ENST00000516533 110 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 SNORA70.18-201ENST00000516696 98 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
CSMD3Q7Z407 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSMD3Q7Z407 MIR4769-201ENST00000584126 77 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 AC006116.10-201ENST00000591836 581 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 AL606834.2-201ENST00000602954 668 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 AC002069.2-201ENST00000603580 883 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 AL354976.1-201ENST00000613843 387 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 AC119674.1-207ENST00000641355 633 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CSMD3Q7Z407 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CSMD3Q7Z407 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC2.58□□□□□ -2
CSMD3Q7Z407 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC2.58□□□□□ -2
CSMD3Q7Z407 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CSMD3Q7Z407 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
CSMD3Q7Z407 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CSMD3Q7Z407 AL121890.1-201ENST00000435457 205 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 SNORA71B-202ENST00000439232 272 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 RAC1P2-201ENST00000511164 579 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 RNA5SP208-201ENST00000516156 78 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.58□□□□□ -2
CSMD3Q7Z407 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.58□□□□□ -2
CSMD3Q7Z407 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.58□□□□□ -2
CSMD3Q7Z407 MIR5186-201ENST00000577504 120 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 AC023509.5-201ENST00000617434 807 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 AP006437.1-201ENST00000641440 3685 ntBASIC2.58□□□□□ -2
CSMD3Q7Z407 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CSMD3Q7Z407 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC2.57□□□□□ -2
CSMD3Q7Z407 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CSMD3Q7Z407 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC2.57□□□□□ -2
CSMD3Q7Z407 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC2.57□□□□□ -2
CSMD3Q7Z407 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CSMD3Q7Z407 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC2.57□□□□□ -2
CSMD3Q7Z407 RPL7P59-201ENST00000447700 943 ntBASIC2.57□□□□□ -2
CSMD3Q7Z407 Y_RNA.638-201ENST00000459374 113 ntBASIC2.57□□□□□ -2
CSMD3Q7Z407 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.57□□□□□ -2
CSMD3Q7Z407 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.57□□□□□ -2
CSMD3Q7Z407 AC008694.2-201ENST00000517591 306 ntBASIC2.57□□□□□ -2
CSMD3Q7Z407 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.57□□□□□ -2
CSMD3Q7Z407 Z95331.1-201ENST00000623075 23112 ntBASIC2.57□□□□□ -2
CSMD3Q7Z407 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC2.57□□□□□ -2
CSMD3Q7Z407 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC2.57□□□□□ -2
CSMD3Q7Z407 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CSMD3Q7Z407 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CSMD3Q7Z407 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CSMD3Q7Z407 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CSMD3Q7Z407 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC2.57□□□□□ -2
CSMD3Q7Z407 RPS21P8-201ENST00000413365 247 ntBASIC2.57□□□□□ -2
CSMD3Q7Z407 AC245054.1-201ENST00000420944 258 ntBASIC2.57□□□□□ -2
CSMD3Q7Z407 AC073335.1-201ENST00000427776 363 ntBASIC2.57□□□□□ -2
CSMD3Q7Z407 AC097713.2-201ENST00000430199 356 ntBASIC2.57□□□□□ -2
CSMD3Q7Z407 AL671855.1-201ENST00000446875 1203 ntBASIC2.57□□□□□ -2
CSMD3Q7Z407 OR7E13P-201ENST00000526052 910 ntBASIC2.57□□□□□ -2
CSMD3Q7Z407 AC000123.3-201ENST00000624029 4975 ntBASIC2.57□□□□□ -2
CSMD3Q7Z407 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CSMD3Q7Z407 AP002001.2-201ENST00000529025 1469 ntBASIC2.57□□□□□ -2
CSMD3Q7Z407 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC2.57□□□□□ -2
CSMD3Q7Z407 SNORA38.1-201ENST00000364172 131 ntBASIC2.57□□□□□ -2
CSMD3Q7Z407 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC2.57□□□□□ -2
CSMD3Q7Z407 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
CSMD3Q7Z407 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC2.57□□□□□ -2
CSMD3Q7Z407 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CSMD3Q7Z407 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
CSMD3Q7Z407 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC2.56□□□□□ -2
CSMD3Q7Z407 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CSMD3Q7Z407 SNORA3C-201ENST00000408792 125 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.56□□□□□ -2
CSMD3Q7Z407 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC2.56□□□□□ -2
CSMD3Q7Z407 AL645931.1-201ENST00000439737 410 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 VN1R25P-201ENST00000443385 738 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms