Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC022079.2-201ENST00000619739 566 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC011978.2-201ENST00000569835 2054 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC006971.1-201ENST00000407916 4486 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC131971.1-201ENST00000332881 1482 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 OR6K3-202ENST00000368146 996 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 OR1L1-202ENST00000373686 1083 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 RNU6-207P-201ENST00000384137 107 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 FABP12P1-201ENST00000401911 322 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 OR4K12P-201ENST00000406538 961 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC069282.1-201ENST00000411911 526 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 RPL21P108-201ENST00000413857 481 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 CEACAMP8-201ENST00000413902 580 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC009237.10-201ENST00000414112 510 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 RAC1P3-201ENST00000416129 580 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 E2F6P2-201ENST00000420708 748 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 COX6CP15-201ENST00000426313 211 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC092162.1-201ENST00000432828 434 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AL592437.1-201ENST00000443781 492 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 Z80107.2-201ENST00000445127 392 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC104306.1-201ENST00000449702 371 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 RHEBP2-201ENST00000450289 600 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 Z95152.1-201ENST00000453556 656 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 HMGN3P1-201ENST00000453847 193 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 TVP23BP2-201ENST00000455082 615 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC005008.1-201ENST00000456151 612 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 SCARNA10-201ENST00000459255 330 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AP000893.1-201ENST00000474462 794 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 RPS4XP20-201ENST00000505751 772 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 GTF2F2P1-201ENST00000511083 675 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 MTCO3P27-201ENST00000514397 196 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 RN7SKP66-201ENST00000516681 231 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC092490.3-201ENST00000545370 572 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 EDDM3DP-201ENST00000554692 434 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 RPL10P14-201ENST00000565265 298 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AL049539.1-201ENST00000611964 459 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.25□□□□□ -1.73
C11orf88Q6PI97 DHX9P1-201ENST00000436565 3076 ntBASIC4.25□□□□□ -1.73
C11orf88Q6PI97 AC011493.1-201ENST00000596753 1632 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 KPNA2P2-201ENST00000419546 1489 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC108751.5-201ENST00000492880 1336 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 SGO1P1-201ENST00000603525 1447 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 RNU5B-1-201ENST00000363286 116 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 RNU6-374P-201ENST00000364146 108 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 RNU6-1226P-201ENST00000384317 107 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 MIR550A3-201ENST00000390735 95 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AL589647.1-201ENST00000402485 466 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 HMGB3P19-201ENST00000403971 560 ntBASIC4.24□□□□□ -1.73
C11orf88Q6PI97 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.24□□□□□ -1.73
C11orf88Q6PI97 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms