Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC083829.1-201ENST00000503756 657 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 RNU6-1028P-201ENST00000517164 93 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AP001207.2-201ENST00000519490 539 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC009643.1-201ENST00000532030 391 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC139103.1-201ENST00000534696 1030 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 MTND1P24-201ENST00000552175 861 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 NIFKP8-201ENST00000560500 874 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 NDUFB4P11-201ENST00000560510 395 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC090751.1-201ENST00000566966 267 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC115085.1-201ENST00000588924 229 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC093765.1-201ENST00000603758 881 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 BNIP3P4-201ENST00000604946 565 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 RNU4-5P-201ENST00000607255 135 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 AC063944.3-201ENST00000609969 533 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 MIR6780A-201ENST00000615089 68 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 BX649567.1-201ENST00000642071 1134 ntBASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM3Q53GG5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 OR52E6-202ENST00000379946 954 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 RNU6-224P-201ENST00000384055 107 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 RNU1-149P-201ENST00000390870 161 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 MIR1271-201ENST00000408537 86 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 OR51B3P-201ENST00000412287 913 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 USP9YP21-201ENST00000420603 432 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 RPL36AP10-201ENST00000421785 322 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 NANOGP5-201ENST00000424456 877 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AL592437.1-201ENST00000443781 492 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 MTND2P8-201ENST00000450555 1025 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 NDUFS5P3-201ENST00000450668 321 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 snoU13.1-201ENST00000459157 104 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 snoU13.22-201ENST00000459428 104 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 RN7SL41P-201ENST00000476144 297 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AC091959.2-201ENST00000477363 321 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AC073358.1-201ENST00000505671 684 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AC093720.1-201ENST00000505681 714 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AC113420.1-201ENST00000507903 571 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 HMGB1P19-201ENST00000517578 577 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AP001372.4-201ENST00000524889 472 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 OR4A2P-201ENST00000527276 913 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AL161713.1-201ENST00000555538 145 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 MTCO1P40-201ENST00000574371 625 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AL031320.1-201ENST00000604177 357 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AC010680.3-201ENST00000604215 520 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AP005432.2-201ENST00000608162 586 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AP001521.2-201ENST00000608772 546 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AC009974.1-201ENST00000608881 455 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AL445423.1-201ENST00000609941 536 ntBASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM3Q53GG5 AC009452.1-201ENST00000640823 606 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms