Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDH1Q08174 MRPL50P4-201ENST00000446432 475 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH1Q08174 KF459542.1-201ENST00000450908 553 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 AL121877.1-201ENST00000453704 622 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDH1Q08174 RNU6-261P-201ENST00000459506 102 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDH1Q08174 AC015524.1-201ENST00000491585 472 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.06□□□□□ -1.44
PCDH1Q08174 SNORA19.2-201ENST00000516013 114 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDH1Q08174 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDH1Q08174 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDH1Q08174 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDH1Q08174 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC6.06□□□□□ -1.44
PCDH1Q08174 AC090651.1-201ENST00000567865 634 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 AL078601.3-201ENST00000573303 535 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 AC027229.1-201ENST00000583887 253 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH1Q08174 BNIP3P22-201ENST00000593399 556 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PCDH1Q08174 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDH1Q08174 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDH1Q08174 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH1Q08174 AC116667.2-201ENST00000641075 823 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH1Q08174 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDH1Q08174 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH1Q08174 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH1Q08174 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH1Q08174 AC097504.1-201ENST00000515103 2415 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH1Q08174 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PCDH1Q08174 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH1Q08174 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDH1Q08174 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PCDH1Q08174 TCP11X1-202ENST00000622971 1372 ntBASIC6.06□□□□□ -1.44
PCDH1Q08174 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH1Q08174 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PCDH1Q08174 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH1Q08174 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH1Q08174 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH1Q08174 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDH1Q08174 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH1Q08174 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH1Q08174 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH1Q08174 RPL23AP57-201ENST00000332361 466 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 Y_RNA.138-201ENST00000363462 102 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH1Q08174 SNORA69-201ENST00000383895 132 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 U3.23-201ENST00000391132 200 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 RN7SKP32-201ENST00000410167 303 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 RN7SKP151-201ENST00000410230 316 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH1Q08174 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDH1Q08174 TPMTP2-201ENST00000414372 726 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC6.05□□□□□ -1.44
PCDH1Q08174 MTCO3P12-201ENST00000416718 547 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 AL353729.1-201ENST00000425044 720 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH1Q08174 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH1Q08174 AL606489.2-201ENST00000433886 234 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDH1Q08174 RPL7P12-201ENST00000446719 750 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 HMGB1P7-201ENST00000450921 612 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 AL513533.1-201ENST00000453728 415 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 HMGN3P1-201ENST00000453847 193 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH1Q08174 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDH1Q08174 RPL7P19-201ENST00000469948 618 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 RPL31P50-201ENST00000471002 296 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 AC010301.1-201ENST00000473936 355 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 CR383656.1-201ENST00000484916 377 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
PCDH1Q08174 RN7SL649P-201ENST00000496974 275 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH1Q08174 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDH1Q08174 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH1Q08174 COX6CP8-201ENST00000522620 226 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 CYCSP25-201ENST00000525280 316 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH1Q08174 AP001858.2-201ENST00000536213 601 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 AC012182.1-201ENST00000570133 895 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH1Q08174 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.05□□□□□ -1.44
PCDH1Q08174 MIR4420-201ENST00000583944 77 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 MAGOH2P-202ENST00000584384 429 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 SNORD39.3-201ENST00000584451 71 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.05□□□□□ -1.44
PCDH1Q08174 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH1Q08174 AC078899.5-201ENST00000612475 178 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 AL355974.3-201ENST00000617383 467 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH1Q08174 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDH1Q08174 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDH1Q08174 AC100810.6-201ENST00000638068 285 ntBASIC6.05□□□□□ -1.44
PCDH1Q08174 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDH1Q08174 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms