Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.73□□□□□ -1.65
RAE1P78406 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.73□□□□□ -1.65
RAE1P78406 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.73□□□□□ -1.65
RAE1P78406 AP005262.1-201ENST00000582646 997 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.73□□□□□ -1.65
RAE1P78406 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.73□□□□□ -1.65
RAE1P78406 AL031985.2-201ENST00000600955 480 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AC103881.1-201ENST00000603476 538 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AC133552.5-201ENST00000604266 540 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AC004948.1-201ENST00000609858 672 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AC243654.2-201ENST00000612843 443 ntBASIC4.73□□□□□ -1.65
RAE1P78406 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.73□□□□□ -1.65
RAE1P78406 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.73□□□□□ -1.65
RAE1P78406 SNORA11.6-201ENST00000619030 128 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RAE1P78406 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.73□□□□□ -1.65
RAE1P78406 AC091931.1-201ENST00000623488 728 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AC091965.5-201ENST00000624785 342 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.73□□□□□ -1.65
RAE1P78406 FP325313.1-201ENST00000638228 703 ntBASIC4.73□□□□□ -1.65
RAE1P78406 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.73□□□□□ -1.65
RAE1P78406 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
RAE1P78406 AC025574.1-201ENST00000554784 1653 ntBASIC4.73□□□□□ -1.65
RAE1P78406 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
RAE1P78406 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.73□□□□□ -1.65
RAE1P78406 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.73□□□□□ -1.65
RAE1P78406 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 AC009643.2-201ENST00000603543 1448 ntBASIC4.72□□□□□ -1.65
RAE1P78406 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAE1P78406 AC087359.1-201ENST00000508335 1740 ntBASIC4.72□□□□□ -1.65
RAE1P78406 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAE1P78406 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RAE1P78406 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAE1P78406 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RAE1P78406 RPL23P2-201ENST00000320371 421 ntBASIC4.72□□□□□ -1.65
RAE1P78406 Y_RNA.77-201ENST00000362962 107 ntBASIC4.72□□□□□ -1.65
RAE1P78406 RNU6-582P-201ENST00000362989 107 ntBASIC4.72□□□□□ -1.65
RAE1P78406 RNU4-24P-201ENST00000364565 139 ntBASIC4.72□□□□□ -1.65
RAE1P78406 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RAE1P78406 MIR223-201ENST00000385204 110 ntBASIC4.72□□□□□ -1.65
RAE1P78406 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RAE1P78406 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.72□□□□□ -1.65
RAE1P78406 RNU2-65P-201ENST00000410162 185 ntBASIC4.72□□□□□ -1.65
RAE1P78406 RNU2-42P-201ENST00000410697 113 ntBASIC4.72□□□□□ -1.65
RAE1P78406 RNU6-272P-201ENST00000411028 104 ntBASIC4.72□□□□□ -1.65
RAE1P78406 RN7SKP273-201ENST00000411392 314 ntBASIC4.72□□□□□ -1.65
RAE1P78406 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.72□□□□□ -1.65
RAE1P78406 TMBIM7P-201ENST00000418074 855 ntBASIC4.72□□□□□ -1.65
RAE1P78406 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.72□□□□□ -1.65
RAE1P78406 OR2AH1P-201ENST00000425717 928 ntBASIC4.72□□□□□ -1.65
RAE1P78406 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.72□□□□□ -1.65
RAE1P78406 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.72□□□□□ -1.65
RAE1P78406 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.72□□□□□ -1.65
RAE1P78406 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.72□□□□□ -1.65
RAE1P78406 AC098826.1-201ENST00000433943 471 ntBASIC4.72□□□□□ -1.65
RAE1P78406 PPIAP13-201ENST00000434706 478 ntBASIC4.72□□□□□ -1.65
RAE1P78406 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.72□□□□□ -1.65
RAE1P78406 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.72□□□□□ -1.65
RAE1P78406 ACTR3P2-201ENST00000439585 1257 ntBASIC4.72□□□□□ -1.65
RAE1P78406 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.72□□□□□ -1.65
RAE1P78406 PPIAP20-201ENST00000449839 135 ntBASIC4.72□□□□□ -1.65
RAE1P78406 RNU6-1218P-201ENST00000458990 108 ntBASIC4.72□□□□□ -1.65
RAE1P78406 RPL21P71-201ENST00000465598 459 ntBASIC4.72□□□□□ -1.65
RAE1P78406 RPS18P6-201ENST00000476880 458 ntBASIC4.72□□□□□ -1.65
RAE1P78406 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.72□□□□□ -1.65
RAE1P78406 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.72□□□□□ -1.65
RAE1P78406 AC147055.4-201ENST00000504399 745 ntBASIC4.72□□□□□ -1.65
RAE1P78406 AC005178.1-201ENST00000508392 440 ntBASIC4.72□□□□□ -1.65
RAE1P78406 COX6B1P5-201ENST00000509843 249 ntBASIC4.72□□□□□ -1.65
RAE1P78406 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.72□□□□□ -1.65
RAE1P78406 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.72□□□□□ -1.65
RAE1P78406 RPS27AP18-201ENST00000515536 459 ntBASIC4.72□□□□□ -1.65
RAE1P78406 RN7SKP260-201ENST00000516907 149 ntBASIC4.72□□□□□ -1.65
RAE1P78406 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.72□□□□□ -1.65
RAE1P78406 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.72□□□□□ -1.65
RAE1P78406 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.72□□□□□ -1.65
RAE1P78406 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.72□□□□□ -1.65
RAE1P78406 NMNAT1P1-201ENST00000554095 876 ntBASIC4.72□□□□□ -1.65
RAE1P78406 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.72□□□□□ -1.65
RAE1P78406 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.72□□□□□ -1.65
RAE1P78406 AC007225.2-201ENST00000562529 256 ntBASIC4.72□□□□□ -1.65
RAE1P78406 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.72□□□□□ -1.65
RAE1P78406 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RAE1P78406 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RAE1P78406 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.72□□□□□ -1.65
RAE1P78406 AC115085.1-201ENST00000588924 229 ntBASIC4.72□□□□□ -1.65
RAE1P78406 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.72□□□□□ -1.65
RAE1P78406 AC068790.2-201ENST00000602601 557 ntBASIC4.72□□□□□ -1.65
RAE1P78406 TAS2R6P-201ENST00000605022 826 ntBASIC4.72□□□□□ -1.65
RAE1P78406 AL049794.2-201ENST00000616301 365 ntBASIC4.72□□□□□ -1.65
RAE1P78406 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.72□□□□□ -1.65
RAE1P78406 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.72□□□□□ -1.65
RAE1P78406 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.72□□□□□ -1.65
RAE1P78406 LINC01739-205ENST00000641890 573 ntBASIC4.72□□□□□ -1.65
RAE1P78406 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RAE1P78406 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms