Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COPAP53621 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 AP001642.1-201ENST00000624727 2117 ntBASIC5.18□□□□□ -1.58
COPAP53621 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPAP53621 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPAP53621 AL034370.1-201ENST00000397254 1590 ntBASIC5.18□□□□□ -1.58
COPAP53621 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COPAP53621 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 RN7SKP149-201ENST00000363008 344 ntBASIC5.18□□□□□ -1.58
COPAP53621 RNA5SP428-201ENST00000365129 132 ntBASIC5.18□□□□□ -1.58
COPAP53621 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPAP53621 MIR589-201ENST00000385238 99 ntBASIC5.18□□□□□ -1.58
COPAP53621 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COPAP53621 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.18□□□□□ -1.58
COPAP53621 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPAP53621 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 GSTA8P-201ENST00000404253 637 ntBASIC5.18□□□□□ -1.58
COPAP53621 RN7SKP16-201ENST00000410180 299 ntBASIC5.18□□□□□ -1.58
COPAP53621 RNU2-6P-201ENST00000411404 190 ntBASIC5.18□□□□□ -1.58
COPAP53621 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.18□□□□□ -1.58
COPAP53621 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.18□□□□□ -1.58
COPAP53621 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 CHEK2P3-201ENST00000416118 248 ntBASIC5.18□□□□□ -1.58
COPAP53621 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 RPL21P43-201ENST00000425440 472 ntBASIC5.18□□□□□ -1.58
COPAP53621 NPM1P24-201ENST00000428039 894 ntBASIC5.18□□□□□ -1.58
COPAP53621 RPL34P6-201ENST00000432390 345 ntBASIC5.18□□□□□ -1.58
COPAP53621 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.18□□□□□ -1.58
COPAP53621 GEMIN8P3-201ENST00000445417 720 ntBASIC5.18□□□□□ -1.58
COPAP53621 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.18□□□□□ -1.58
COPAP53621 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.18□□□□□ -1.58
COPAP53621 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.18□□□□□ -1.58
COPAP53621 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.18□□□□□ -1.58
COPAP53621 RPL37P3-201ENST00000456825 293 ntBASIC5.18□□□□□ -1.58
COPAP53621 RNA5SP103-201ENST00000459503 118 ntBASIC5.18□□□□□ -1.58
COPAP53621 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.18□□□□□ -1.58
COPAP53621 RPS29P22-201ENST00000472363 168 ntBASIC5.18□□□□□ -1.58
COPAP53621 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.18□□□□□ -1.58
COPAP53621 COX6B1P5-201ENST00000509843 249 ntBASIC5.18□□□□□ -1.58
COPAP53621 AC138938.1-201ENST00000515431 782 ntBASIC5.18□□□□□ -1.58
COPAP53621 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.18□□□□□ -1.58
COPAP53621 SNORD116-26-201ENST00000516006 96 ntBASIC5.18□□□□□ -1.58
COPAP53621 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.18□□□□□ -1.58
COPAP53621 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPAP53621 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.18□□□□□ -1.58
COPAP53621 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.18□□□□□ -1.58
COPAP53621 AC008088.1-201ENST00000580993 280 ntBASIC5.18□□□□□ -1.58
COPAP53621 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 RN7SL435P-201ENST00000584418 282 ntBASIC5.18□□□□□ -1.58
COPAP53621 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 AC011453.2-201ENST00000603737 729 ntBASIC5.18□□□□□ -1.58
COPAP53621 AC011626.1-201ENST00000604710 562 ntBASIC5.18□□□□□ -1.58
COPAP53621 MEMO1P5-201ENST00000604810 406 ntBASIC5.18□□□□□ -1.58
COPAP53621 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 BX005214.3-202ENST00000619809 325 ntBASIC5.18□□□□□ -1.58
COPAP53621 AC026422.1-201ENST00000623961 452 ntBASIC5.18□□□□□ -1.58
COPAP53621 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPAP53621 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPAP53621 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPAP53621 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPAP53621 AP005901.5-201ENST00000545779 1796 ntBASIC5.18□□□□□ -1.58
COPAP53621 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 AC022893.2-201ENST00000564832 3296 ntBASIC5.18□□□□□ -1.58
COPAP53621 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.18□□□□□ -1.58
COPAP53621 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.18□□□□□ -1.58
COPAP53621 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPAP53621 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COPAP53621 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.18□□□□□ -1.58
COPAP53621 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPAP53621 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.17□□□□□ -1.58
COPAP53621 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPAP53621 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.17□□□□□ -1.58
COPAP53621 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPAP53621 AC104454.1-201ENST00000421341 1401 ntBASIC5.17□□□□□ -1.58
COPAP53621 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
COPAP53621 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.17□□□□□ -1.58
COPAP53621 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COPAP53621 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
COPAP53621 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPAP53621 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.17□□□□□ -1.58
COPAP53621 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.17□□□□□ -1.58
COPAP53621 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.17□□□□□ -1.58
COPAP53621 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
COPAP53621 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.17□□□□□ -1.58
COPAP53621 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.17□□□□□ -1.58
COPAP53621 HMGB1P48-201ENST00000446155 598 ntBASIC5.17□□□□□ -1.58
COPAP53621 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.17□□□□□ -1.58
COPAP53621 EXTL2P1-201ENST00000446218 416 ntBASIC5.17□□□□□ -1.58
COPAP53621 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.17□□□□□ -1.58
COPAP53621 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.17□□□□□ -1.58
COPAP53621 NECAP1P2-201ENST00000455668 727 ntBASIC5.17□□□□□ -1.58
COPAP53621 AL122001.1-201ENST00000457027 370 ntBASIC5.17□□□□□ -1.58
COPAP53621 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.17□□□□□ -1.58
COPAP53621 RN7SL189P-201ENST00000468631 289 ntBASIC5.17□□□□□ -1.58
COPAP53621 AC015724.1-201ENST00000478577 156 ntBASIC5.17□□□□□ -1.58
COPAP53621 RN7SL814P-201ENST00000487715 300 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms