Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.96□□□□□ -1.78
RPA3P35244 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.96□□□□□ -1.78
RPA3P35244 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPA3P35244 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPA3P35244 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPA3P35244 USP9YP4-201ENST00000424401 1745 ntBASIC3.95□□□□□ -1.78
RPA3P35244 DDX18P3-201ENST00000404856 2007 ntBASIC3.95□□□□□ -1.78
RPA3P35244 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RPA3P35244 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RPA3P35244 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.95□□□□□ -1.78
RPA3P35244 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.95□□□□□ -1.78
RPA3P35244 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPA3P35244 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.95□□□□□ -1.78
RPA3P35244 MIR423-201ENST00000362201 94 ntBASIC3.95□□□□□ -1.78
RPA3P35244 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPA3P35244 AC019155.1-201ENST00000382242 574 ntBASIC3.95□□□□□ -1.78
RPA3P35244 HMGB3P19-201ENST00000403971 560 ntBASIC3.95□□□□□ -1.78
RPA3P35244 AC010740.1-201ENST00000417035 684 ntBASIC3.95□□□□□ -1.78
RPA3P35244 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.95□□□□□ -1.78
RPA3P35244 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.95□□□□□ -1.78
RPA3P35244 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.95□□□□□ -1.78
RPA3P35244 AC114755.5-201ENST00000447760 831 ntBASIC3.95□□□□□ -1.78
RPA3P35244 RPS7P7-201ENST00000463499 571 ntBASIC3.95□□□□□ -1.78
RPA3P35244 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.95□□□□□ -1.78
RPA3P35244 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.95□□□□□ -1.78
RPA3P35244 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.95□□□□□ -1.78
RPA3P35244 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.95□□□□□ -1.78
RPA3P35244 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.95□□□□□ -1.78
RPA3P35244 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.95□□□□□ -1.78
RPA3P35244 AC090312.1-201ENST00000580637 348 ntBASIC3.95□□□□□ -1.78
RPA3P35244 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.95□□□□□ -1.78
RPA3P35244 AC025946.2-201ENST00000603398 234 ntBASIC3.95□□□□□ -1.78
RPA3P35244 RNU4-89P-201ENST00000607443 133 ntBASIC3.95□□□□□ -1.78
RPA3P35244 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.95□□□□□ -1.78
RPA3P35244 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RPA3P35244 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPA3P35244 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPA3P35244 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPA3P35244 HSPA8P1-201ENST00000425843 1833 ntBASIC3.95□□□□□ -1.78
RPA3P35244 BX005019.1-201ENST00000561881 1810 ntBASIC3.95□□□□□ -1.78
RPA3P35244 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.95□□□□□ -1.78
RPA3P35244 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPA3P35244 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.94□□□□□ -1.78
RPA3P35244 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.94□□□□□ -1.78
RPA3P35244 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPA3P35244 CR381670.1-201ENST00000624291 1693 ntBASIC3.94□□□□□ -1.78
RPA3P35244 AC093535.2-201ENST00000624769 2326 ntBASIC3.94□□□□□ -1.78
RPA3P35244 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPA3P35244 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPA3P35244 MIR708-201ENST00000390708 88 ntBASIC3.94□□□□□ -1.78
RPA3P35244 HSPE1P8-201ENST00000406997 288 ntBASIC3.94□□□□□ -1.78
RPA3P35244 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.94□□□□□ -1.78
RPA3P35244 RPL21P109-201ENST00000422213 475 ntBASIC3.94□□□□□ -1.78
RPA3P35244 RSL24D1P6-201ENST00000426934 401 ntBASIC3.94□□□□□ -1.78
RPA3P35244 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.94□□□□□ -1.78
RPA3P35244 RPS26P40-201ENST00000435209 294 ntBASIC3.94□□□□□ -1.78
RPA3P35244 AC083863.1-201ENST00000438811 231 ntBASIC3.94□□□□□ -1.78
RPA3P35244 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.94□□□□□ -1.78
RPA3P35244 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.94□□□□□ -1.78
RPA3P35244 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.94□□□□□ -1.78
RPA3P35244 IGBP1P5-201ENST00000507524 1000 ntBASIC3.94□□□□□ -1.78
RPA3P35244 MTCO1P35-201ENST00000515270 228 ntBASIC3.94□□□□□ -1.78
RPA3P35244 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.94□□□□□ -1.78
RPA3P35244 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.94□□□□□ -1.78
RPA3P35244 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.94□□□□□ -1.78
RPA3P35244 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.94□□□□□ -1.78
RPA3P35244 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.94□□□□□ -1.78
RPA3P35244 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.94□□□□□ -1.78
RPA3P35244 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.94□□□□□ -1.78
RPA3P35244 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.94□□□□□ -1.78
RPA3P35244 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.94□□□□□ -1.78
RPA3P35244 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.94□□□□□ -1.78
RPA3P35244 AL591034.3-201ENST00000605511 685 ntBASIC3.94□□□□□ -1.78
RPA3P35244 AC090948.2-201ENST00000607363 564 ntBASIC3.94□□□□□ -1.78
RPA3P35244 AC112484.5-201ENST00000624189 228 ntBASIC3.94□□□□□ -1.78
RPA3P35244 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.94□□□□□ -1.78
RPA3P35244 MIR492-201ENST00000638676 116 ntBASIC3.94□□□□□ -1.78
RPA3P35244 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.94□□□□□ -1.78
RPA3P35244 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPA3P35244 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPA3P35244 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.94□□□□□ -1.78
RPA3P35244 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RPA3P35244 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPA3P35244 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RPA3P35244 ASNSP1-201ENST00000518311 1939 ntBASIC3.93□□□□□ -1.78
RPA3P35244 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.93□□□□□ -1.78
RPA3P35244 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RPA3P35244 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RPA3P35244 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RPA3P35244 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPA3P35244 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPA3P35244 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPA3P35244 RNA5SP130-201ENST00000364431 114 ntBASIC3.93□□□□□ -1.78
RPA3P35244 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.93□□□□□ -1.78
RPA3P35244 HLFP1-201ENST00000402375 499 ntBASIC3.93□□□□□ -1.78
RPA3P35244 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.93□□□□□ -1.78
RPA3P35244 AMD1P2-201ENST00000412936 992 ntBASIC3.93□□□□□ -1.78
RPA3P35244 TPT1P2-201ENST00000413105 503 ntBASIC3.93□□□□□ -1.78
RPA3P35244 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.93□□□□□ -1.78
RPA3P35244 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms