Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AP001120.4-201ENST00000590231 108 ntBASIC8.87□□□□□ -0.99
HOXD11P31277 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
HOXD11P31277 MIR6864-201ENST00000617935 70 ntBASIC8.87□□□□□ -0.99
HOXD11P31277 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC8.87□□□□□ -0.99
HOXD11P31277 ASTN2-204ENST00000358637 3411 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HOXD11P31277 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HOXD11P31277 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
HOXD11P31277 SYNJ1-206ENST00000433931 4852 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
HOXD11P31277 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
HOXD11P31277 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC8.87□□□□□ -0.99
HOXD11P31277 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HOXD11P31277 CNTN4-205ENST00000427331 4980 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
HOXD11P31277 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
HOXD11P31277 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HOXD11P31277 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
HOXD11P31277 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HOXD11P31277 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HOXD11P31277 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC8.86□□□□□ -0.99
HOXD11P31277 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC8.86□□□□□ -0.99
HOXD11P31277 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.86□□□□□ -0.99
HOXD11P31277 U8.1-201ENST00000362843 134 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 Y_RNA.163-201ENST00000363702 113 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 RNU6-801P-201ENST00000364087 105 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 Y_RNA.281-201ENST00000364774 94 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 RNY1P7-201ENST00000384743 110 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 MIR1269A-201ENST00000408636 105 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 RN7SKP137-201ENST00000411074 307 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 MLLT10P1-201ENST00000418346 262 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 AC090774.1-201ENST00000435925 246 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 CYCSP32-201ENST00000440548 321 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC8.86□□□□□ -0.99
HOXD11P31277 RN7SKP43-201ENST00000516173 320 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 RNU6-561P-201ENST00000516222 102 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 AC136628.3-201ENST00000521868 290 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 AC006199.1-201ENST00000548728 219 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 AC013391.1-201ENST00000560477 459 ntTSL 3 BASIC8.86□□□□□ -0.99
HOXD11P31277 FLJ21408-202ENST00000565060 565 ntTSL 5 BASIC8.86□□□□□ -0.99
HOXD11P31277 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC8.86□□□□□ -0.99
HOXD11P31277 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC8.86□□□□□ -0.99
HOXD11P31277 AC103564.3-201ENST00000621194 220 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
HOXD11P31277 U91328.2-201ENST00000606723 4130 ntTSL 2 BASIC8.86□□□□□ -0.99
HOXD11P31277 PDE4DIPP1-201ENST00000420737 1641 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.86□□□□□ -0.99
HOXD11P31277 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HOXD11P31277 AC093768.1-201ENST00000505987 2173 ntBASIC8.86□□□□□ -0.99
HOXD11P31277 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.86□□□□□ -0.99
HOXD11P31277 CAB39L-212ENST00000610540 3692 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
HOXD11P31277 KCNH6-205ENST00000583023 3821 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
HOXD11P31277 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
HOXD11P31277 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HOXD11P31277 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC8.85□□□□□ -0.99
HOXD11P31277 ANAPC16-204ENST00000615507 3100 ntTSL 3 BASIC8.85□□□□□ -0.99
HOXD11P31277 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
HOXD11P31277 WDR91-202ENST00000423565 4500 ntTSL 5 BASIC8.85□□□□□ -0.99
HOXD11P31277 PSMA3-AS1-214ENST00000557660 2360 ntTSL 2 BASIC8.85□□□□□ -0.99
HOXD11P31277 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HOXD11P31277 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC8.85□□□□□ -0.99
HOXD11P31277 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HOXD11P31277 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HOXD11P31277 AC090971.4-201ENST00000560291 1800 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC8.85□□□□□ -0.99
HOXD11P31277 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HOXD11P31277 Y_RNA.244-201ENST00000364484 109 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 RNU6-1310P-201ENST00000384153 107 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 MT-TT-201ENST00000387460 66 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 RNU2-54P-201ENST00000410299 190 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 LIPC-203ENST00000414170 2968 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HOXD11P31277 AC138623.1-201ENST00000418060 216 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC8.85□□□□□ -0.99
HOXD11P31277 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC8.85□□□□□ -0.99
HOXD11P31277 AC114964.1-201ENST00000502306 1111 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HOXD11P31277 RN7SKP19-201ENST00000516016 252 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 RNU6-58P-201ENST00000517143 103 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 IGLC5-201ENST00000519670 293 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 AC105219.3-201ENST00000527579 374 ntTSL 2 BASIC8.85□□□□□ -0.99
HOXD11P31277 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC8.85□□□□□ -0.99
HOXD11P31277 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC8.85□□□□□ -0.99
HOXD11P31277 AC003002.2-201ENST00000597658 456 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
HOXD11P31277 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.85□□□□□ -0.99
HOXD11P31277 AC105254.2-201ENST00000603636 436 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 AL109918.2-201ENST00000605188 279 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 AC093458.1-201ENST00000608912 222 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 MIR6780B-201ENST00000610307 79 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 AC025166.1-201ENST00000612411 163 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 AL138693.1-201ENST00000622219 129 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 AC024580.1-201ENST00000623020 674 ntBASIC8.85□□□□□ -0.99
HOXD11P31277 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
HOXD11P31277 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
HOXD11P31277 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC8.85□□□□□ -0.99
HOXD11P31277 C1orf226-203ENST00000458626 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
HOXD11P31277 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC8.85□□□□□ -0.99
HOXD11P31277 ZFP1-202ENST00000393430 3250 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HOXD11P31277 GGA3-201ENST00000537686 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HOXD11P31277 ARMC4-201ENST00000305242 3572 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HOXD11P31277 SLFN13-210ENST00000534689 3058 ntTSL 2 BASIC8.85□□□□□ -0.99
HOXD11P31277 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.85□□□□□ -0.99
HOXD11P31277 PPARG-207ENST00000397015 1722 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HOXD11P31277 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 246.3 ms