Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RPL34P26-201ENST00000445636 354 ntBASIC4.48□□□□□ -1.69
CDH3P22223 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH3P22223 AC104306.1-201ENST00000449702 371 ntBASIC4.48□□□□□ -1.69
CDH3P22223 MTATP6P14-201ENST00000455189 673 ntBASIC4.48□□□□□ -1.69
CDH3P22223 snoU13.1-201ENST00000459157 104 ntBASIC4.48□□□□□ -1.69
CDH3P22223 SCARNA10-201ENST00000459255 330 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.48□□□□□ -1.69
CDH3P22223 AC098799.3-201ENST00000506095 438 ntBASIC4.48□□□□□ -1.69
CDH3P22223 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH3P22223 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH3P22223 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.48□□□□□ -1.69
CDH3P22223 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.48□□□□□ -1.69
CDH3P22223 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH3P22223 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.48□□□□□ -1.69
CDH3P22223 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH3P22223 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH3P22223 AC069061.3-201ENST00000582254 823 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.48□□□□□ -1.69
CDH3P22223 SLC25A36P1-201ENST00000590111 465 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AL139395.1-201ENST00000603662 160 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AC008745.1-201ENST00000604064 271 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AC079610.2-201ENST00000604818 690 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AC097504.2-201ENST00000608088 454 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AC078880.5-201ENST00000617845 421 ntBASIC4.48□□□□□ -1.69
CDH3P22223 MIR7154-201ENST00000620673 73 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AC024023.1-201ENST00000624530 922 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AL356118.1-201ENST00000635272 1078 ntBASIC4.48□□□□□ -1.69
CDH3P22223 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH3P22223 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH3P22223 EOGT-210ENST00000615922 1931 ntBASIC4.48□□□□□ -1.69
CDH3P22223 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
CDH3P22223 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH3P22223 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH3P22223 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH3P22223 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH3P22223 AC008549.2-201ENST00000333482 706 ntBASIC4.47□□□□□ -1.69
CDH3P22223 RNA5SP52-201ENST00000362448 134 ntBASIC4.47□□□□□ -1.69
CDH3P22223 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.47□□□□□ -1.69
CDH3P22223 RN7SKP44-201ENST00000363602 316 ntBASIC4.47□□□□□ -1.69
CDH3P22223 RNU6-452P-201ENST00000384406 107 ntBASIC4.47□□□□□ -1.69
CDH3P22223 ARL4AP5-201ENST00000404372 599 ntBASIC4.47□□□□□ -1.69
CDH3P22223 RPL23AP48-201ENST00000406913 488 ntBASIC4.47□□□□□ -1.69
CDH3P22223 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH3P22223 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH3P22223 NPM1P24-201ENST00000428039 894 ntBASIC4.47□□□□□ -1.69
CDH3P22223 CNOT7P1-201ENST00000429006 852 ntBASIC4.47□□□□□ -1.69
CDH3P22223 RPS6P12-201ENST00000432491 726 ntBASIC4.47□□□□□ -1.69
CDH3P22223 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH3P22223 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH3P22223 AC097499.1-201ENST00000444277 208 ntBASIC4.47□□□□□ -1.69
CDH3P22223 AC044797.1-201ENST00000445744 679 ntBASIC4.47□□□□□ -1.69
CDH3P22223 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH3P22223 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.47□□□□□ -1.69
CDH3P22223 MTND2P28-201ENST00000457540 1044 ntBASIC4.47□□□□□ -1.69
CDH3P22223 RPS26P28-201ENST00000470806 348 ntBASIC4.47□□□□□ -1.69
CDH3P22223 OR52A4P-201ENST00000472867 958 ntBASIC4.47□□□□□ -1.69
CDH3P22223 RN7SL481P-201ENST00000477764 299 ntBASIC4.47□□□□□ -1.69
CDH3P22223 MTND4LP2-201ENST00000502312 285 ntBASIC4.47□□□□□ -1.69
CDH3P22223 AC025445.1-201ENST00000502728 300 ntBASIC4.47□□□□□ -1.69
CDH3P22223 RN7SKP157-201ENST00000516174 282 ntBASIC4.47□□□□□ -1.69
CDH3P22223 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH3P22223 AC090281.1-201ENST00000523019 276 ntBASIC4.47□□□□□ -1.69
CDH3P22223 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDH3P22223 CYCSP28-201ENST00000534284 321 ntBASIC4.47□□□□□ -1.69
CDH3P22223 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.47□□□□□ -1.69
CDH3P22223 AL121834.1-201ENST00000572284 509 ntBASIC4.47□□□□□ -1.69
CDH3P22223 AC090666.1-201ENST00000578241 445 ntBASIC4.47□□□□□ -1.69
CDH3P22223 AC126365.2-201ENST00000580630 379 ntBASIC4.47□□□□□ -1.69
CDH3P22223 AC090330.1-201ENST00000588646 764 ntBASIC4.47□□□□□ -1.69
CDH3P22223 AC068790.4-201ENST00000602474 263 ntBASIC4.47□□□□□ -1.69
CDH3P22223 AC018618.2-201ENST00000604770 446 ntBASIC4.47□□□□□ -1.69
CDH3P22223 AC015804.1-201ENST00000622935 435 ntBASIC4.47□□□□□ -1.69
CDH3P22223 AC007342.8-201ENST00000623278 678 ntBASIC4.47□□□□□ -1.69
CDH3P22223 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.47□□□□□ -1.69
CDH3P22223 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH3P22223 MIR7641-1-201ENST00000627518 61 ntBASIC4.47□□□□□ -1.69
CDH3P22223 AC083865.1-201ENST00000636634 831 ntBASIC4.47□□□□□ -1.69
CDH3P22223 MFSD8-216ENST00000641147 4009 ntBASIC4.47□□□□□ -1.69
CDH3P22223 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH3P22223 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CDH3P22223 AC134882.1-201ENST00000603738 1676 ntBASIC4.47□□□□□ -1.69
CDH3P22223 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CDH3P22223 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
CDH3P22223 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.46□□□□□ -1.69
CDH3P22223 KARSP3-201ENST00000571212 1504 ntBASIC4.46□□□□□ -1.69
CDH3P22223 CASC19-261ENST00000641853 1638 ntBASIC4.46□□□□□ -1.69
CDH3P22223 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CDH3P22223 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH3P22223 AL132640.2-201ENST00000559968 1698 ntBASIC4.46□□□□□ -1.7
CDH3P22223 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CDH3P22223 RNU1-32P-201ENST00000363937 159 ntBASIC4.46□□□□□ -1.7
CDH3P22223 RNA5SP513-201ENST00000364648 118 ntBASIC4.46□□□□□ -1.7
CDH3P22223 RNU6-468P-201ENST00000384003 109 ntBASIC4.46□□□□□ -1.7
CDH3P22223 MIR93-201ENST00000385024 80 ntBASIC4.46□□□□□ -1.7
CDH3P22223 RNU6-1000P-201ENST00000391066 106 ntBASIC4.46□□□□□ -1.7
CDH3P22223 HMGB3P19-201ENST00000403971 560 ntBASIC4.46□□□□□ -1.7
CDH3P22223 HMGB1P13-201ENST00000406019 642 ntBASIC4.46□□□□□ -1.7
CDH3P22223 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CDH3P22223 AC008173.1-201ENST00000418901 264 ntBASIC4.46□□□□□ -1.7
CDH3P22223 UQCRBP1-201ENST00000421129 336 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms