Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC092745.2-202ENST00000411880 369 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 RPL21P108-201ENST00000413857 481 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AL357078.2-201ENST00000416486 427 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 CNOT7P1-201ENST00000429006 852 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AC114495.1-201ENST00000441274 436 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 H2AFZP6-201ENST00000444403 394 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 RPL23AP73-201ENST00000492507 471 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 IGBP1P5-201ENST00000507524 1000 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 RAB9BP1-201ENST00000519581 626 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AC083923.1-201ENST00000523708 376 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AF230666.2-201ENST00000602328 725 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AC068790.4-201ENST00000602474 263 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AC005191.1-201ENST00000603950 358 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AL021368.1-201ENST00000607490 540 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 Z98755.1-201ENST00000407015 1384 ntBASIC4.47□□□□□ -1.69
HLA-DPA1P20036 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPA1P20036 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.46□□□□□ -1.69
HLA-DPA1P20036 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DPA1P20036 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.46□□□□□ -1.69
HLA-DPA1P20036 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DPA1P20036 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.46□□□□□ -1.69
HLA-DPA1P20036 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.46□□□□□ -1.69
HLA-DPA1P20036 ENSAP3-201ENST00000312710 333 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 RNU6-650P-201ENST00000365658 111 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 MIR153-1-201ENST00000384914 90 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 MIR3065-201ENST00000390137 79 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 ATF1P1-201ENST00000406040 927 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 RPL31P45-201ENST00000419532 356 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 RPEP3-201ENST00000425462 676 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 RPL23AP1-201ENST00000428990 471 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC023141.6-201ENST00000429418 337 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 ETF1P3-201ENST00000430422 1160 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 FTH1P6-201ENST00000430768 320 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 ELOCP3-201ENST00000439303 348 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 UBE2V1P3-201ENST00000439651 417 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 RNFT1P2-201ENST00000443064 757 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 MTND2P28-201ENST00000457540 1044 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 snoU13.1-201ENST00000459157 104 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 RPL21P103-201ENST00000479921 488 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 RN7SL812P-201ENST00000493791 279 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC012170.1-201ENST00000495139 359 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 OSBPL9P3-201ENST00000534523 595 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AL442163.2-201ENST00000553912 710 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC233280.2-201ENST00000603917 1070 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC008745.1-201ENST00000604064 271 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AL160290.3-201ENST00000604869 165 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 Z98200.1-201ENST00000607298 470 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC105429.2-201ENST00000610567 517 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC012409.3-201ENST00000611343 981 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC138907.10-201ENST00000623708 983 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AC091948.2-201ENST00000636510 279 ntBASIC4.46□□□□□ -1.7
HLA-DPA1P20036 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DPA1P20036 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 ZNF33CP-201ENST00000432492 2030 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 IL6STP1-201ENST00000346911 1020 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 RN7SKP167-201ENST00000411047 285 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AC016397.1-201ENST00000412463 242 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms