Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
ATF4P18848 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
ATF4P18848 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.49□□□□□ -1.53
ATF4P18848 SNORA5.1-201ENST00000384275 131 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AC006511.2-201ENST00000388966 660 ntBASIC5.49□□□□□ -1.53
ATF4P18848 RNU6-278P-201ENST00000390945 109 ntBASIC5.49□□□□□ -1.53
ATF4P18848 RNU2-62P-201ENST00000410868 191 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.49□□□□□ -1.53
ATF4P18848 SNX18P13-201ENST00000412442 529 ntBASIC5.49□□□□□ -1.53
ATF4P18848 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATF4P18848 USP9YP6-201ENST00000413550 854 ntBASIC5.49□□□□□ -1.53
ATF4P18848 NPM1P4-201ENST00000414095 812 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.49□□□□□ -1.53
ATF4P18848 RPL30P16-201ENST00000419341 429 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.49□□□□□ -1.53
ATF4P18848 MTCO1P20-201ENST00000425366 358 ntBASIC5.49□□□□□ -1.53
ATF4P18848 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.49□□□□□ -1.53
ATF4P18848 MTCO2P19-201ENST00000427513 598 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.49□□□□□ -1.53
ATF4P18848 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.49□□□□□ -1.53
ATF4P18848 AL662791.1-201ENST00000441992 928 ntBASIC5.49□□□□□ -1.53
ATF4P18848 GTF2F2P2-201ENST00000445825 721 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AC108059.3-201ENST00000456388 214 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AC013429.1-201ENST00000456604 422 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AC117395.2-201ENST00000463122 1128 ntBASIC5.49□□□□□ -1.53
ATF4P18848 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
ATF4P18848 RN7SL58P-201ENST00000473445 294 ntBASIC5.49□□□□□ -1.53
ATF4P18848 RN7SL516P-201ENST00000496127 297 ntBASIC5.49□□□□□ -1.53
ATF4P18848 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
ATF4P18848 LINC01085-203ENST00000511195 326 ntBASIC5.49□□□□□ -1.53
ATF4P18848 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATF4P18848 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.49□□□□□ -1.53
ATF4P18848 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.49□□□□□ -1.53
ATF4P18848 IGHVIII-26-1-201ENST00000520387 250 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.49□□□□□ -1.53
ATF4P18848 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.49□□□□□ -1.53
ATF4P18848 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.49□□□□□ -1.53
ATF4P18848 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.49□□□□□ -1.53
ATF4P18848 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.49□□□□□ -1.53
ATF4P18848 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.49□□□□□ -1.53
ATF4P18848 GSTP1P1-201ENST00000548078 319 ntBASIC5.49□□□□□ -1.53
ATF4P18848 SETP7-201ENST00000552169 453 ntBASIC5.49□□□□□ -1.53
ATF4P18848 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.49□□□□□ -1.53
ATF4P18848 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.49□□□□□ -1.53
ATF4P18848 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.49□□□□□ -1.53
ATF4P18848 AC073091.2-201ENST00000603205 907 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AL390058.1-201ENST00000603834 629 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC5.49□□□□□ -1.53
ATF4P18848 AC104184.1-201ENST00000607513 721 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AL391813.2-201ENST00000609113 322 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AC105429.2-201ENST00000610567 517 ntBASIC5.49□□□□□ -1.53
ATF4P18848 pRNA.9-201ENST00000618609 89 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.49□□□□□ -1.53
ATF4P18848 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC5.49□□□□□ -1.53
ATF4P18848 MIR1321-201ENST00000637766 79 ntBASIC5.49□□□□□ -1.53
ATF4P18848 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.49□□□□□ -1.53
ATF4P18848 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.49□□□□□ -1.53
ATF4P18848 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATF4P18848 THAP12P4-201ENST00000528321 2266 ntBASIC5.49□□□□□ -1.53
ATF4P18848 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.49□□□□□ -1.53
ATF4P18848 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.49□□□□□ -1.53
ATF4P18848 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATF4P18848 AL049555.1-201ENST00000562834 1933 ntBASIC5.48□□□□□ -1.53
ATF4P18848 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATF4P18848 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATF4P18848 AC110373.1-201ENST00000505994 3505 ntBASIC5.48□□□□□ -1.53
ATF4P18848 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.48□□□□□ -1.53
ATF4P18848 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATF4P18848 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATF4P18848 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATF4P18848 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.48□□□□□ -1.53
ATF4P18848 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATF4P18848 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
ATF4P18848 MTCO1P24-201ENST00000515438 1558 ntBASIC5.48□□□□□ -1.53
ATF4P18848 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.48□□□□□ -1.53
ATF4P18848 GVINP1-202ENST00000531871 7271 ntBASIC5.48□□□□□ -1.53
ATF4P18848 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATF4P18848 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATF4P18848 RNA5SP448-201ENST00000363151 111 ntBASIC5.48□□□□□ -1.53
ATF4P18848 RNA5SP302-201ENST00000364896 100 ntBASIC5.48□□□□□ -1.53
ATF4P18848 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATF4P18848 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ATF4P18848 AC019155.1-201ENST00000382242 574 ntBASIC5.48□□□□□ -1.53
ATF4P18848 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
ATF4P18848 RNU6-780P-201ENST00000391030 104 ntBASIC5.48□□□□□ -1.53
ATF4P18848 AC113608.1-201ENST00000398740 305 ntBASIC5.48□□□□□ -1.53
ATF4P18848 RN7SKP137-201ENST00000411074 307 ntBASIC5.48□□□□□ -1.53
ATF4P18848 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.48□□□□□ -1.53
ATF4P18848 AC005517.2-201ENST00000424673 553 ntBASIC5.48□□□□□ -1.53
ATF4P18848 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.48□□□□□ -1.53
ATF4P18848 HMGB3P12-201ENST00000438745 556 ntBASIC5.48□□□□□ -1.53
ATF4P18848 RPL29P29-201ENST00000448725 423 ntBASIC5.48□□□□□ -1.53
ATF4P18848 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.48□□□□□ -1.53
ATF4P18848 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.48□□□□□ -1.53
ATF4P18848 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.48□□□□□ -1.53
ATF4P18848 RPL10P7-201ENST00000495649 625 ntBASIC5.48□□□□□ -1.53
ATF4P18848 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATF4P18848 AC073648.3-201ENST00000504939 925 ntBASIC5.48□□□□□ -1.53
ATF4P18848 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.48□□□□□ -1.53
ATF4P18848 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms