Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MIR183-201ENST00000384958 110 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGA1P17096 RPS29P4-201ENST00000414733 161 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGA1P17096 AL353748.1-201ENST00000440753 474 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGA1P17096 AC006480.1-201ENST00000449887 378 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 RNA5SP154-201ENST00000516193 111 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 DUXAP2-201ENST00000519198 589 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC3.88□□□□□ -1.79
HMGA1P17096 OR7E13P-201ENST00000526052 910 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGA1P17096 AC006960.3-201ENST00000561845 705 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 MIR3944-201ENST00000581277 108 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGA1P17096 AC020914.6-201ENST00000594327 272 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 AC019176.2-201ENST00000611579 315 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 AC015967.1-201ENST00000619893 476 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.88□□□□□ -1.79
HMGA1P17096 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGA1P17096 USP8P1-201ENST00000494673 3183 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 LINC00561-201ENST00000565815 2738 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGA1P17096 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HMGA1P17096 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
HMGA1P17096 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGA1P17096 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGA1P17096 AC093535.2-201ENST00000624769 2326 ntBASIC3.88□□□□□ -1.79
HMGA1P17096 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGA1P17096 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HMGA1P17096 OSBPL9P1-201ENST00000604744 1469 ntBASIC3.87□□□□□ -1.79
HMGA1P17096 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGA1P17096 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HMGA1P17096 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA1P17096 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HMGA1P17096 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA1P17096 SNORD46.1-201ENST00000364139 104 ntBASIC3.87□□□□□ -1.79
HMGA1P17096 OR5AW1P-201ENST00000426334 1006 ntBASIC3.87□□□□□ -1.79
HMGA1P17096 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.87□□□□□ -1.79
HMGA1P17096 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGA1P17096 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGA1P17096 AL645931.1-201ENST00000439737 410 ntBASIC3.87□□□□□ -1.79
HMGA1P17096 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA1P17096 OR52Y1P-201ENST00000452418 828 ntBASIC3.87□□□□□ -1.79
HMGA1P17096 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGA1P17096 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA1P17096 AC110768.1-201ENST00000509222 400 ntBASIC3.87□□□□□ -1.79
HMGA1P17096 RN7SKP13-201ENST00000515933 244 ntBASIC3.87□□□□□ -1.79
HMGA1P17096 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.87□□□□□ -1.79
HMGA1P17096 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGA1P17096 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.87□□□□□ -1.79
HMGA1P17096 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
HMGA1P17096 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.87□□□□□ -1.79
HMGA1P17096 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.87□□□□□ -1.79
HMGA1P17096 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA1P17096 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA1P17096 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA1P17096 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA1P17096 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA1P17096 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA1P17096 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA1P17096 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA1P17096 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA1P17096 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
HMGA1P17096 AC007823.1-201ENST00000569932 1566 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
HMGA1P17096 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA1P17096 SNORD9-201ENST00000362566 104 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 AC245054.1-201ENST00000420944 258 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 CYCSP4-201ENST00000429682 331 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGA1P17096 AC087650.1-201ENST00000431445 468 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGA1P17096 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA1P17096 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGA1P17096 RN7SL293P-201ENST00000481765 281 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGA1P17096 HMGB3P13-201ENST00000511263 607 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 RANP9-201ENST00000519957 271 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 SUMO2P20-201ENST00000520803 283 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 OR8I1P-201ENST00000529291 931 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 DEFB109D-201ENST00000529497 240 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 OR5B10P-201ENST00000532869 642 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 AC008011.1-201ENST00000545989 227 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGA1P17096 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
HMGA1P17096 U3.45-201ENST00000607547 219 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 AC092354.2-201ENST00000607786 514 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 AC012314.7-201ENST00000619693 93 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 AC015908.5-201ENST00000623289 343 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.86□□□□□ -1.79
HMGA1P17096 U6.105-201ENST00000637379 88 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA1P17096 AL627171.1-201ENST00000618845 1308 ntBASIC3.86□□□□□ -1.79
HMGA1P17096 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGA1P17096 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGA1P17096 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGA1P17096 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGA1P17096 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA1P17096 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms