Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AL035690.1-201ENST00000490892 383 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 AL035404.1-201ENST00000497982 568 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXD8P13378 AC093809.1-201ENST00000509155 340 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 Y_RNA.672-201ENST00000516289 104 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 IGKV2-19-201ENST00000518132 283 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 AC027309.2-201ENST00000520566 192 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 AP003080.1-202ENST00000526526 915 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXD8P13378 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXD8P13378 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXD8P13378 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.52□□□□□ -1.37
HOXD8P13378 AC034268.2-201ENST00000571784 482 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 TPMTP1-201ENST00000592307 737 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 VN1R80P-201ENST00000597126 338 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXD8P13378 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXD8P13378 AC018926.3-201ENST00000618841 406 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXD8P13378 YWHAEP7-203ENST00000622054 312 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXD8P13378 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXD8P13378 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXD8P13378 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXD8P13378 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXD8P13378 LINC01963-201ENST00000562038 3148 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 MAPK10-261ENST00000641050 3109 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
HOXD8P13378 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXD8P13378 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HOXD8P13378 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXD8P13378 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 AC006378.2-201ENST00000623178 2476 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
HOXD8P13378 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 GNG5P1-201ENST00000255500 204 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 IGKV7-3-201ENST00000357453 298 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 SNORD81.2-201ENST00000365153 76 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 Y_RNA.394-201ENST00000383942 103 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 AL356432.1-201ENST00000405809 419 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HOXD8P13378 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 AC092634.6-201ENST00000418558 192 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXD8P13378 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXD8P13378 AC133104.1-201ENST00000429100 218 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXD8P13378 AL731534.1-201ENST00000434711 269 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 LSM1P1-201ENST00000438629 273 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXD8P13378 AL935212.3-201ENST00000450729 284 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 ACA64.4-201ENST00000459070 127 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXD8P13378 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXD8P13378 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXD8P13378 MTND6P2-201ENST00000512226 524 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXD8P13378 AP000790.1-201ENST00000528891 737 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.51□□□□□ -1.37
HOXD8P13378 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXD8P13378 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXD8P13378 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXD8P13378 MIR4260-201ENST00000583107 67 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXD8P13378 MTND5P42-201ENST00000637720 498 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXD8P13378 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HOXD8P13378 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HOXD8P13378 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXD8P13378 AC123769.1-201ENST00000530992 3192 ntBASIC6.51□□□□□ -1.37
HOXD8P13378 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
HOXD8P13378 UGT2B26P-201ENST00000508672 1613 ntBASIC6.5□□□□□ -1.37
HOXD8P13378 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
HOXD8P13378 AC007842.1-201ENST00000597336 2039 ntBASIC6.5□□□□□ -1.37
HOXD8P13378 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXD8P13378 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXD8P13378 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
HOXD8P13378 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXD8P13378 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXD8P13378 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXD8P13378 AC130304.1-201ENST00000622942 2385 ntBASIC6.5□□□□□ -1.37
HOXD8P13378 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXD8P13378 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXD8P13378 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXD8P13378 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXD8P13378 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXD8P13378 FRG1BP-201ENST00000278882 761 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms