Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AL080312.1-201ENST00000256654 824 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AL391987.6-201ENST00000305671 199 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 SNORD50.1-201ENST00000362987 71 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 RNA5SP448-201ENST00000363151 111 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 RNA5SP218-201ENST00000363188 109 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 RNU6-682P-201ENST00000363843 106 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 RNU6-1154P-201ENST00000391001 104 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 RNU6-1203P-201ENST00000410703 110 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 RN7SKP39-201ENST00000410773 322 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 RPL36AP36-201ENST00000418616 301 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 FTOP1-201ENST00000419363 861 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AL136097.1-201ENST00000456945 913 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AC008496.1-201ENST00000509131 295 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 EIF3KP1-201ENST00000513279 656 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AC120036.3-201ENST00000517826 292 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 CYCSP28-201ENST00000534284 321 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AC103710.2-201ENST00000609912 942 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AC064801.1-201ENST00000612025 407 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AC011369.2-201ENST00000624423 1567 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 ZNF285B-201ENST00000561698 1767 ntBASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 Y_RNA.237-201ENST00000364439 102 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 RNU4-42P-201ENST00000364738 142 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 RNA5SP427-201ENST00000365323 119 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 SNORA51.11-201ENST00000384442 131 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 RNU6-306P-201ENST00000384617 107 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 RN7SKP235-201ENST00000410662 305 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 RPL29P29-201ENST00000448725 423 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 PSPC1P2-201ENST00000455130 225 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 AL049830.2-201ENST00000480072 201 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 RN7SKP283-201ENST00000517197 270 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 IGLV1-62-201ENST00000518003 441 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 HMGN1P28-201ENST00000521340 364 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 AC087257.2-201ENST00000538759 928 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 AC090651.1-201ENST00000567865 634 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 MIR3135A-201ENST00000578460 77 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 AL355333.1-201ENST00000605632 279 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 AC002044.1-201ENST00000606707 158 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 AL021918.2-201ENST00000613415 194 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 MIR8089-201ENST00000620165 82 ntBASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.26□□□□□ -1.25
VPS9D1Q9Y2B5 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms