Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU6-619P-201ENST00000365146 108 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 Y_RNA.402-201ENST00000383972 102 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 RPL11P3-201ENST00000395256 523 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC016739.1-201ENST00000405359 345 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 CBX1P3-201ENST00000413296 527 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 BX284632.2-201ENST00000421091 399 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AL034379.1-201ENST00000423216 253 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 ZYG11AP1-201ENST00000430329 837 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC096775.1-201ENST00000437724 448 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AL512605.1-202ENST00000441919 381 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AL359955.2-201ENST00000445380 353 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 RPL39P6-201ENST00000448289 150 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 UBFD1P1-201ENST00000473259 814 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC006539.1-201ENST00000481419 501 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 NENFP3-201ENST00000503735 313 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC009646.1-201ENST00000510455 318 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 SCARNA18.1-201ENST00000516330 83 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 RNU6-358P-201ENST00000516564 75 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 RNU6-885P-201ENST00000516607 104 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC138832.1-201ENST00000522871 556 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 TRIM51DP-201ENST00000529746 596 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 POLR2KP1-201ENST00000553226 168 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AL138976.2-201ENST00000563989 694 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 UBE2V2P2-201ENST00000587677 504 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC006115.2-201ENST00000596823 202 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AL596327.1-201ENST00000603629 213 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 RPL12P48-201ENST00000605620 304 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AC055764.2-201ENST00000610089 670 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 MIR6793-201ENST00000612376 63 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AP005431.1-201ENST00000618479 319 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 AL139089.1-201ENST00000620372 975 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 DCAF13P1-201ENST00000495256 1330 ntBASIC5.17□□□□□ -1.58
SEC61A2Q9H9S3 ZNF37BP-203ENST00000452306 1352 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC012078.1-201ENST00000405035 1646 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AL157700.1-201ENST00000561973 1432 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC138907.8-201ENST00000623981 2256 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 Y_RNA.160-201ENST00000363677 92 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 RNA5SP500-201ENST00000364486 119 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 Y_RNA.535-201ENST00000384612 99 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 HMGN1P20-201ENST00000411849 300 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AL513175.1-201ENST00000431492 780 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 UBE2V1P5-201ENST00000440070 405 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms