Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 SNX18P1Y-201ENST00000616231 511 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC022079.2-201ENST00000619739 566 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC005086.4-201ENST00000623065 213 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VMP1Q96GC9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VMP1Q96GC9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VMP1Q96GC9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC024341.1-201ENST00000526444 1552 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC073429.2-201ENST00000569694 1444 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VMP1Q96GC9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VMP1Q96GC9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
VMP1Q96GC9 OR4K17-201ENST00000315543 1032 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC008549.2-201ENST00000333482 706 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 RNU1-83P-201ENST00000363426 164 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 HDGFP1-201ENST00000405943 252 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VMP1Q96GC9 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 AL606495.1-201ENST00000422100 813 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 YWHAEP5-201ENST00000431545 765 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 AL512661.1-201ENST00000434586 1253 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC074367.1-201ENST00000438685 1125 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VMP1Q96GC9 BX248409.1-201ENST00000455497 255 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 CYCSP20-201ENST00000473154 315 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VMP1Q96GC9 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VMP1Q96GC9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC007016.1-201ENST00000512110 244 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 Y_RNA.719-201ENST00000517156 106 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 OR6C73P-201ENST00000546432 358 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 ATP5J2P6-201ENST00000565203 266 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 AL049634.3-201ENST00000604968 457 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC116651.1-201ENST00000609724 556 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC004232.3-201ENST00000622977 525 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC091953.3-201ENST00000623220 236 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VMP1Q96GC9 AC017104.4-201ENST00000636283 1592 ntBASIC4.56□□□□□ -1.68
VMP1Q96GC9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VMP1Q96GC9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VMP1Q96GC9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
VMP1Q96GC9 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VMP1Q96GC9 AC107068.1-201ENST00000563286 4218 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
VMP1Q96GC9 AL672167.1-205ENST00000641112 3080 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VMP1Q96GC9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VMP1Q96GC9 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.55□□□□□ -1.68
VMP1Q96GC9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VMP1Q96GC9 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
VMP1Q96GC9 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VMP1Q96GC9 RNU1-108P-201ENST00000362556 161 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 RNU1-20P-201ENST00000363314 162 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 RNA5SP513-201ENST00000364648 118 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 ENSAP1-201ENST00000392855 326 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 DSTNP4-201ENST00000399472 474 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 ATP5F1P6-201ENST00000402768 767 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 AC114755.2-201ENST00000413520 361 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 AL445183.3-201ENST00000414168 502 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.55□□□□□ -1.68
VMP1Q96GC9 TBCAP2-201ENST00000416175 326 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 RBMY2KP-201ENST00000418221 992 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 QRSL1P2-201ENST00000418582 964 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.55□□□□□ -1.68
VMP1Q96GC9 AC241520.1-201ENST00000422654 1099 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.55□□□□□ -1.68
VMP1Q96GC9 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.55□□□□□ -1.68
VMP1Q96GC9 FAR2P4-202ENST00000425399 584 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 OR2B7P-201ENST00000429302 934 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 UBE2V1P1-201ENST00000430836 445 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 RPL21P110-201ENST00000433345 446 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 CKS1BP5-201ENST00000434172 273 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.55□□□□□ -1.68
VMP1Q96GC9 AC073052.1-201ENST00000440417 714 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.55□□□□□ -1.68
VMP1Q96GC9 AC234781.3-201ENST00000452540 973 ntBASIC4.55□□□□□ -1.68
VMP1Q96GC9 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.55□□□□□ -1.68
VMP1Q96GC9 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms