Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 HSPE1P12-201ENST00000412576 301 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AC048351.1-201ENST00000420064 602 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 RWDD4P2-201ENST00000426392 563 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 Z85994.2-201ENST00000434327 452 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 RNU6-1218P-201ENST00000458990 108 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 RN7SL585P-201ENST00000470538 280 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AC006517.1-201ENST00000480485 328 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 RWDD4P1-201ENST00000488019 565 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AL132838.2-201ENST00000492041 314 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 PRELID3BP7-201ENST00000503606 469 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 HPRT1P2-201ENST00000505250 544 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AC108064.1-201ENST00000513791 460 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 MIR2116-201ENST00000517221 80 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 MYL12AP1-201ENST00000518490 515 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 BMS1P7-201ENST00000602440 1052 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 RPL23AP61-201ENST00000623642 466 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 Z73965.1-201ENST00000623412 2297 ntBASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ECHDC3Q96DC8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 CASC19-261ENST00000641853 1638 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 SPRR2C-201ENST00000290702 219 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 SNORA37-201ENST00000384504 129 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 PPIAP31-201ENST00000405422 495 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 DPY19L1P2-201ENST00000426647 915 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 RPS6P12-201ENST00000432491 726 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 MTCYBP29-201ENST00000436327 1006 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 RPL29P14-201ENST00000495837 428 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AC018797.3-201ENST00000513388 1241 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 DEFB109D-201ENST00000529497 240 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 RPL23AP87-202ENST00000573039 466 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AC067959.1-201ENST00000604334 379 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AC078899.5-201ENST00000612475 178 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AC000123.2-201ENST00000623124 461 ntBASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ECHDC3Q96DC8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 MIR372-201ENST00000362225 67 ntBASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 RNU6-891P-201ENST00000384280 111 ntBASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 MIR92A2-201ENST00000385299 75 ntBASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 RPL21P65-201ENST00000406094 466 ntBASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 PGBD4P8-201ENST00000412993 562 ntBASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 AL355994.1-201ENST00000424379 260 ntBASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 AL138785.1-201ENST00000425821 331 ntBASIC4.09□□□□□ -1.75
ECHDC3Q96DC8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms