Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.06□□□□□ -1.28
HLA-CQ95604 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
HLA-CQ95604 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HLA-CQ95604 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.06□□□□□ -1.28
HLA-CQ95604 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
HLA-CQ95604 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC7.06□□□□□ -1.28
HLA-CQ95604 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
HLA-CQ95604 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 U3.11-201ENST00000364476 212 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 RNU6-209P-201ENST00000384118 107 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 RNU6-328P-201ENST00000390887 106 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 U3.20-201ENST00000390909 217 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 AL359694.1-201ENST00000403247 604 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 AC017078.1-201ENST00000416146 368 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 MTND2P29-201ENST00000438595 412 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 AL035090.1-201ENST00000454835 332 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC7.06□□□□□ -1.28
HLA-CQ95604 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC7.06□□□□□ -1.28
HLA-CQ95604 AC079804.1-201ENST00000461922 436 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.06□□□□□ -1.28
HLA-CQ95604 RN7SL629P-201ENST00000489622 285 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC7.06□□□□□ -1.28
HLA-CQ95604 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 AC116562.3-201ENST00000506136 177 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.06□□□□□ -1.28
HLA-CQ95604 FTH1P9-201ENST00000513251 355 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 PRMT5P1-201ENST00000514351 598 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 AC027801.3-201ENST00000515049 698 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 RNU6-256P-201ENST00000516747 97 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 RNU6-273P-201ENST00000516937 96 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 RNA5SP503-201ENST00000517047 117 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC7.06□□□□□ -1.28
HLA-CQ95604 AC087360.1-201ENST00000518788 616 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.06□□□□□ -1.28
HLA-CQ95604 AC068587.5-201ENST00000528506 175 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 HMGB1P42-201ENST00000532126 553 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 CYCSP28-201ENST00000534284 321 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC7.06□□□□□ -1.28
HLA-CQ95604 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 AL118558.2-201ENST00000556294 238 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
HLA-CQ95604 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.06□□□□□ -1.28
HLA-CQ95604 AC062037.2-201ENST00000610137 73 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 MIR6811-201ENST00000620409 58 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 AC127024.6-201ENST00000621598 424 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.06□□□□□ -1.28
HLA-CQ95604 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC7.06□□□□□ -1.28
HLA-CQ95604 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
HLA-CQ95604 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
HLA-CQ95604 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC7.06□□□□□ -1.28
HLA-CQ95604 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC7.06□□□□□ -1.28
HLA-CQ95604 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.06□□□□□ -1.28
HLA-CQ95604 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-CQ95604 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
HLA-CQ95604 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-CQ95604 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-CQ95604 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.05□□□□□ -1.28
HLA-CQ95604 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.05□□□□□ -1.28
HLA-CQ95604 MTND5P27-201ENST00000428871 1720 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-CQ95604 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
HLA-CQ95604 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
HLA-CQ95604 MRPS6P2-201ENST00000381143 370 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 RNU6-39P-201ENST00000384344 107 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-CQ95604 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.05□□□□□ -1.28
HLA-CQ95604 AL121916.1-201ENST00000429405 308 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 HMGB1P12-201ENST00000438594 598 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.05□□□□□ -1.28
HLA-CQ95604 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.05□□□□□ -1.28
HLA-CQ95604 AL162395.1-201ENST00000457882 422 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-CQ95604 AC106872.2-201ENST00000494303 480 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.05□□□□□ -1.28
HLA-CQ95604 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.05□□□□□ -1.28
HLA-CQ95604 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.05□□□□□ -1.28
HLA-CQ95604 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC7.05□□□□□ -1.28
HLA-CQ95604 AC090136.1-201ENST00000520009 240 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 DEFB109D-201ENST00000529497 240 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.05□□□□□ -1.28
HLA-CQ95604 AP000763.2-201ENST00000540641 163 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC7.05□□□□□ -1.28
HLA-CQ95604 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-CQ95604 AL512605.2-201ENST00000592972 256 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 AC010424.2-201ENST00000607594 443 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 AL121612.2-201ENST00000612261 482 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 AL627230.1-201ENST00000613077 211 ntBASIC7.05□□□□□ -1.28
HLA-CQ95604 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms