Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTL9Q8NET4 UBE2CP3-201ENST00000502715 450 ntBASIC4.81□□□□□ -1.64
RTL9Q8NET4 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.81□□□□□ -1.64
RTL9Q8NET4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.81□□□□□ -1.64
RTL9Q8NET4 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.81□□□□□ -1.64
RTL9Q8NET4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.81□□□□□ -1.64
RTL9Q8NET4 MIR5187-201ENST00000583479 76 ntBASIC4.81□□□□□ -1.64
RTL9Q8NET4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.81□□□□□ -1.64
RTL9Q8NET4 AL773545.4-201ENST00000637262 310 ntBASIC4.81□□□□□ -1.64
RTL9Q8NET4 U6.105-201ENST00000637379 88 ntBASIC4.81□□□□□ -1.64
RTL9Q8NET4 AL513478.4-201ENST00000641636 310 ntBASIC4.81□□□□□ -1.64
RTL9Q8NET4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTL9Q8NET4 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTL9Q8NET4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTL9Q8NET4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTL9Q8NET4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL9Q8NET4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL9Q8NET4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 SNORD3H-201ENST00000384486 214 ntBASIC4.8□□□□□ -1.64
RTL9Q8NET4 PTMAP5-201ENST00000393073 333 ntBASIC4.8□□□□□ -1.64
RTL9Q8NET4 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 SNORA74D-201ENST00000516404 141 ntBASIC4.8□□□□□ -1.64
RTL9Q8NET4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTL9Q8NET4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTL9Q8NET4 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 AL139089.1-201ENST00000620372 975 ntBASIC4.8□□□□□ -1.64
RTL9Q8NET4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTL9Q8NET4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL9Q8NET4 MTCO1P22-201ENST00000604619 1360 ntBASIC4.8□□□□□ -1.64
RTL9Q8NET4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL9Q8NET4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL9Q8NET4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL9Q8NET4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTL9Q8NET4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL9Q8NET4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RTL9Q8NET4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTL9Q8NET4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTL9Q8NET4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 AC092647.1-201ENST00000420654 287 ntBASIC4.79□□□□□ -1.64
RTL9Q8NET4 AL139247.1-201ENST00000422768 325 ntBASIC4.79□□□□□ -1.64
RTL9Q8NET4 AP000907.1-201ENST00000428428 510 ntBASIC4.79□□□□□ -1.64
RTL9Q8NET4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 RPL7L1P1-201ENST00000448259 785 ntBASIC4.79□□□□□ -1.64
RTL9Q8NET4 RPS17P13-201ENST00000448974 407 ntBASIC4.79□□□□□ -1.64
RTL9Q8NET4 AL451050.1-201ENST00000450126 415 ntBASIC4.79□□□□□ -1.64
RTL9Q8NET4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 PLGLA-201ENST00000465668 449 ntBASIC4.79□□□□□ -1.64
RTL9Q8NET4 AC008802.1-201ENST00000519121 791 ntBASIC4.79□□□□□ -1.64
RTL9Q8NET4 UBTFL9-201ENST00000534504 1148 ntBASIC4.79□□□□□ -1.64
RTL9Q8NET4 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTL9Q8NET4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 AC005412.1-201ENST00000580812 1049 ntBASIC4.79□□□□□ -1.64
RTL9Q8NET4 MIR3922-201ENST00000585192 84 ntBASIC4.79□□□□□ -1.64
RTL9Q8NET4 RNU1-30P-201ENST00000606575 163 ntBASIC4.79□□□□□ -1.64
RTL9Q8NET4 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 AC095038.2-201ENST00000621464 1070 ntBASIC4.79□□□□□ -1.64
RTL9Q8NET4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTL9Q8NET4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.79□□□□□ -1.64
RTL9Q8NET4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTL9Q8NET4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTL9Q8NET4 MIR483-201ENST00000385070 76 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 AL390879.2-203ENST00000426943 1121 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 RPS3AP12-201ENST00000443616 753 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 PRDX3P3-201ENST00000447765 522 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RTL9Q8NET4 AC113430.1-201ENST00000506872 718 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 RNA5SP164-201ENST00000516533 110 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 OR4A2P-201ENST00000527276 913 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RTL9Q8NET4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RTL9Q8NET4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms