Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC023050.2-201ENST00000544968 387 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 AL049830.4-201ENST00000555149 351 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 CBX3P2-202ENST00000583365 535 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC093227.2-201ENST00000589357 285 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC135507.1-201ENST00000607214 561 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC090948.1-201ENST00000607464 549 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC007349.4-201ENST00000608114 532 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC015804.1-201ENST00000622935 435 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC084035.1-201ENST00000634543 607 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC090897.3-201ENST00000636973 1157 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC104454.1-201ENST00000421341 1401 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC083843.2-201ENST00000568248 6253 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE4Q8N205 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE4Q8N205 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 AP000526.1-201ENST00000603308 1388 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE4Q8N205 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE4Q8N205 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE4Q8N205 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC008432.1-201ENST00000615912 1320 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE4Q8N205 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE4Q8N205 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 RNU6-31P-201ENST00000384388 108 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC022028.1-201ENST00000412054 408 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 RAP1BP1-201ENST00000412709 553 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 TATDN1P1-201ENST00000414123 891 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 TMSB10P2-201ENST00000416049 131 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 HMGB1P49-201ENST00000418882 569 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 RPS3AP37-201ENST00000419176 745 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 AL356387.2-201ENST00000422272 243 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 AL160175.1-201ENST00000428124 247 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 AL035407.1-201ENST00000429211 571 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 GTF2IP3-201ENST00000433887 494 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC084290.1-201ENST00000434995 374 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC000041.1-201ENST00000439655 175 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 RPL23AP93-201ENST00000440847 484 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 Z95327.1-201ENST00000446082 482 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 RN7SL303P-201ENST00000469773 251 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 RPS3AP43-201ENST00000479743 781 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC111000.2-201ENST00000507775 550 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC133963.2-201ENST00000513686 578 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 SNORA31.9-201ENST00000516429 84 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 AL391156.1-201ENST00000554965 554 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 AL035411.2-201ENST00000604022 421 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC024060.1-201ENST00000607052 494 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC023043.4-201ENST00000612081 449 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC090246.1-201ENST00000616499 426 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC090582.1-201ENST00000636321 199 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 OR8B1P-202ENST00000641132 1178 ntBASIC5.78□□□□□ -1.48
SYNE4Q8N205 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE4Q8N205 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE4Q8N205 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE4Q8N205 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE4Q8N205 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE4Q8N205 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNE4Q8N205 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNE4Q8N205 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.77□□□□□ -1.48
SYNE4Q8N205 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
SYNE4Q8N205 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE4Q8N205 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE4Q8N205 AC104446.1-201ENST00000613728 1321 ntBASIC5.77□□□□□ -1.49
SYNE4Q8N205 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms