Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHFQ7M4L6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AL592182.3-201ENST00000642132 3304 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHFQ7M4L6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHFQ7M4L6 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 U3.2-201ENST00000362981 210 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 RNU1-83P-201ENST00000363426 164 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 RNU6-560P-201ENST00000364007 108 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 RNA5SP242-201ENST00000364171 118 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 SNORA66-201ENST00000384792 133 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 SNORD65.1-201ENST00000390889 71 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 GSTA8P-201ENST00000404253 637 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AL121834.1-202ENST00000404494 277 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 DUTP5-201ENST00000406790 469 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 RNA5SP146-201ENST00000410743 123 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 MTND2P18-201ENST00000419962 1030 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 GTF2IP23-201ENST00000423746 351 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 FABP7P1-201ENST00000424004 391 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 PPIAP13-201ENST00000434706 478 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 NMNAT1P2-201ENST00000435192 860 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 TDGF1P1-201ENST00000445734 527 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 HMGB1P48-201ENST00000446155 598 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC104306.1-201ENST00000449702 371 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 ATG12P2-201ENST00000456830 416 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AL122001.1-201ENST00000457027 370 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 RNU6-1218P-201ENST00000458990 108 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC097484.1-201ENST00000471148 389 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHFQ7M4L6 DYNLL1P6-201ENST00000503440 264 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC021146.3-201ENST00000511911 260 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 RNU6-1129P-201ENST00000515964 104 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AP000926.4-201ENST00000527351 454 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHFQ7M4L6 MTND2P26-201ENST00000528255 1029 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHFQ7M4L6 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC010198.2-201ENST00000550612 259 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 SULT1C2P2-201ENST00000562517 294 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC115085.1-201ENST00000588924 229 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC069545.1-201ENST00000605671 358 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AP004247.3-201ENST00000608682 624 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AL360219.1-201ENST00000610230 366 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 uc_338.18-201ENST00000615451 175 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC022509.4-201ENST00000621404 572 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC026124.2-201ENST00000621847 656 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC019206.1-201ENST00000621938 425 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC012414.7-202ENST00000622705 1090 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC067852.7-201ENST00000623270 535 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 AC092079.1-201ENST00000558620 1985 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHFQ7M4L6 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHFQ7M4L6 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHFQ7M4L6 DHX9P1-201ENST00000436565 3076 ntBASIC4.39□□□□□ -1.71
SHFQ7M4L6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHFQ7M4L6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 RNA5SP28-201ENST00000363841 119 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 RSL24D1P4-201ENST00000400938 484 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 Z97832.1-201ENST00000402490 328 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 RAP1BP1-201ENST00000412709 553 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms