Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LCOR-201ENST00000286067 4542 ntBASIC6.69□□□□□ -1.34
FOXR1Q6PIV2 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.69□□□□□ -1.34
FOXR1Q6PIV2 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
FOXR1Q6PIV2 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
FOXR1Q6PIV2 AL449283.1-201ENST00000602631 3403 ntBASIC6.69□□□□□ -1.34
FOXR1Q6PIV2 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.69□□□□□ -1.34
FOXR1Q6PIV2 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.69□□□□□ -1.34
FOXR1Q6PIV2 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC025574.1-201ENST00000554784 1653 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC003985.2-201ENST00000562268 1669 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 RIOK3P1-201ENST00000418778 1528 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 RNU6-582P-201ENST00000362989 107 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 SNORD115.1-201ENST00000391109 76 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC127391.1-201ENST00000411737 98 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC005517.2-201ENST00000424673 553 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 RPS3AP52-201ENST00000435639 297 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 CACYBPP1-201ENST00000438592 684 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC012512.1-201ENST00000446594 718 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 BTF3P15-201ENST00000455606 336 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 MEMO1P3-201ENST00000459811 302 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC104339.1-201ENST00000465478 348 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC083806.1-201ENST00000468934 316 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 VN1R17P-201ENST00000472048 1090 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 CR383656.1-201ENST00000484916 377 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC106872.2-201ENST00000494303 480 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 RNU6-388P-201ENST00000517012 105 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 RNU6-389P-201ENST00000517048 105 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 TPM3P3-201ENST00000521343 354 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 MIR3154-201ENST00000577829 84 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 UBE2L4-201ENST00000587688 464 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC104785.1-201ENST00000603220 588 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC012368.3-201ENST00000604190 219 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AL133173.2-201ENST00000614270 90 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC005514.1-201ENST00000623521 208 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AC079597.1-201ENST00000624306 508 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 DLEU2L-201ENST00000371086 3555 ntBASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXR1Q6PIV2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 RNU6-216P-201ENST00000363282 104 ntBASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 SUGT1P1-201ENST00000379514 476 ntBASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 RNU6-456P-201ENST00000384493 107 ntBASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 RNU6-831P-201ENST00000384548 107 ntBASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 AL450992.3-201ENST00000413192 568 ntBASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 SRIP2-201ENST00000428470 166 ntBASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 CXCR2P1-202ENST00000443392 1074 ntBASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 AL137792.2-201ENST00000443484 235 ntBASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 TIMM8BP2-201ENST00000445940 251 ntBASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 AC104634.1-201ENST00000452720 462 ntBASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.67□□□□□ -1.34
FOXR1Q6PIV2 AC104849.1-201ENST00000462623 405 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms