Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC068802.1-201ENST00000603420 732 ntBASIC7.62□□□□□ -1.19
VARS2Q5ST30 Z83818.1-201ENST00000603584 150 ntBASIC7.62□□□□□ -1.19
VARS2Q5ST30 AL355877.2-201ENST00000603670 358 ntBASIC7.62□□□□□ -1.19
VARS2Q5ST30 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.62□□□□□ -1.19
VARS2Q5ST30 HMGN2P28-201ENST00000606102 262 ntBASIC7.62□□□□□ -1.19
VARS2Q5ST30 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
VARS2Q5ST30 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC7.62□□□□□ -1.19
VARS2Q5ST30 AC091544.5-201ENST00000620192 3815 ntBASIC7.62□□□□□ -1.19
VARS2Q5ST30 AC073593.1-201ENST00000624500 411 ntBASIC7.62□□□□□ -1.19
VARS2Q5ST30 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.62□□□□□ -1.19
VARS2Q5ST30 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
VARS2Q5ST30 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
VARS2Q5ST30 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
VARS2Q5ST30 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
VARS2Q5ST30 AC008555.1-201ENST00000561778 2757 ntBASIC7.62□□□□□ -1.19
VARS2Q5ST30 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.62□□□□□ -1.19
VARS2Q5ST30 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
VARS2Q5ST30 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
VARS2Q5ST30 AC046144.1-201ENST00000478559 1853 ntBASIC7.62□□□□□ -1.19
VARS2Q5ST30 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.62□□□□□ -1.19
VARS2Q5ST30 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
VARS2Q5ST30 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.62□□□□□ -1.19
VARS2Q5ST30 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.62□□□□□ -1.19
VARS2Q5ST30 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARS2Q5ST30 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARS2Q5ST30 AC093311.1-201ENST00000506586 2021 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARS2Q5ST30 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARS2Q5ST30 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 RNU6-251P-201ENST00000363235 104 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 RNU6-611P-201ENST00000384276 104 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 MIR1303-201ENST00000408625 86 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 RNU6-394P-201ENST00000410735 107 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 UBE2D3P2-201ENST00000424409 445 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 AC002486.2-201ENST00000447806 590 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 PSPC1P2-201ENST00000455130 225 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 AC015724.1-201ENST00000478577 156 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 RPL21P93-201ENST00000480465 489 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 PGAM1P13-201ENST00000507497 754 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 Y_RNA.662-201ENST00000516028 97 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 DEFB109D-201ENST00000529497 240 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 RPA2P3-201ENST00000533268 770 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 AC004024.1-201ENST00000549244 247 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 AC025857.2-201ENST00000602711 238 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 AL031320.1-201ENST00000604177 357 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 AC072026.1-201ENST00000605023 201 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 AC008626.2-201ENST00000624425 248 ntBASIC7.61□□□□□ -1.19
VARS2Q5ST30 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARS2Q5ST30 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARS2Q5ST30 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARS2Q5ST30 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
VARS2Q5ST30 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARS2Q5ST30 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARS2Q5ST30 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.61□□□□□ -1.19
VARS2Q5ST30 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
VARS2Q5ST30 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARS2Q5ST30 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
VARS2Q5ST30 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 Y_RNA.398-201ENST00000383952 99 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 MIR99A-201ENST00000384906 81 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 SNORA53-201ENST00000391141 249 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 AC016027.5-201ENST00000427227 210 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 AL445305.1-201ENST00000432577 575 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 RPL23AP22-201ENST00000437556 453 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 OR13K1P-201ENST00000444577 975 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 SNORA81.1-201ENST00000458922 177 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 AC096922.1-201ENST00000461635 651 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 AC087477.1-201ENST00000465747 340 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms