Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AL358832.1-201ENST00000497800 389 ntBASIC5.36□□□□□ -1.55
CLTCL1P53675 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.36□□□□□ -1.55
CLTCL1P53675 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.36□□□□□ -1.55
CLTCL1P53675 ATE1-AS1-202ENST00000636460 506 ntBASIC5.36□□□□□ -1.55
CLTCL1P53675 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLTCL1P53675 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLTCL1P53675 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.36□□□□□ -1.55
CLTCL1P53675 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLTCL1P53675 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.36□□□□□ -1.55
CLTCL1P53675 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.35□□□□□ -1.55
CLTCL1P53675 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLTCL1P53675 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLTCL1P53675 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLTCL1P53675 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLTCL1P53675 RNU1-33P-201ENST00000364249 162 ntBASIC5.35□□□□□ -1.55
CLTCL1P53675 OR2X1P-201ENST00000421144 687 ntBASIC5.35□□□□□ -1.55
CLTCL1P53675 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLTCL1P53675 KCTD9P3-201ENST00000434597 1169 ntBASIC5.35□□□□□ -1.55
CLTCL1P53675 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.35□□□□□ -1.55
CLTCL1P53675 AL645931.1-201ENST00000439737 410 ntBASIC5.35□□□□□ -1.55
CLTCL1P53675 OR52Y1P-201ENST00000452418 828 ntBASIC5.35□□□□□ -1.55
CLTCL1P53675 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CLTCL1P53675 AC107016.1-201ENST00000550463 337 ntBASIC5.35□□□□□ -1.55
CLTCL1P53675 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.35□□□□□ -1.55
CLTCL1P53675 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.35□□□□□ -1.55
CLTCL1P53675 VN1R92P-201ENST00000598511 928 ntBASIC5.35□□□□□ -1.55
CLTCL1P53675 AC012603.1-201ENST00000606424 528 ntBASIC5.35□□□□□ -1.55
CLTCL1P53675 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.35□□□□□ -1.55
CLTCL1P53675 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLTCL1P53675 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLTCL1P53675 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLTCL1P53675 MTCO1P12-201ENST00000414273 1543 ntBASIC5.35□□□□□ -1.55
CLTCL1P53675 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLTCL1P53675 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CLTCL1P53675 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CLTCL1P53675 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLTCL1P53675 AC058791.1-201ENST00000608412 3198 ntBASIC5.34□□□□□ -1.55
CLTCL1P53675 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CLTCL1P53675 RHOT1P2-201ENST00000366423 333 ntBASIC5.34□□□□□ -1.55
CLTCL1P53675 MIR34B-201ENST00000385076 84 ntBASIC5.34□□□□□ -1.55
CLTCL1P53675 NDUFB4P4-201ENST00000404822 243 ntBASIC5.34□□□□□ -1.55
CLTCL1P53675 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.34□□□□□ -1.55
CLTCL1P53675 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.34□□□□□ -1.55
CLTCL1P53675 AL353748.1-201ENST00000440753 474 ntBASIC5.34□□□□□ -1.55
CLTCL1P53675 AC073587.1-201ENST00000447093 876 ntBASIC5.34□□□□□ -1.55
CLTCL1P53675 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.34□□□□□ -1.55
CLTCL1P53675 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLTCL1P53675 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.34□□□□□ -1.55
CLTCL1P53675 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLTCL1P53675 AC093014.1-201ENST00000548926 724 ntBASIC5.34□□□□□ -1.55
CLTCL1P53675 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.34□□□□□ -1.55
CLTCL1P53675 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.34□□□□□ -1.55
CLTCL1P53675 AL133247.2-201ENST00000603236 482 ntBASIC5.34□□□□□ -1.55
CLTCL1P53675 AC244517.3-201ENST00000616254 1235 ntBASIC5.34□□□□□ -1.55
CLTCL1P53675 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.34□□□□□ -1.55
CLTCL1P53675 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLTCL1P53675 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.34□□□□□ -1.55
CLTCL1P53675 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLTCL1P53675 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLTCL1P53675 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CLTCL1P53675 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLTCL1P53675 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLTCL1P53675 RPS7P15-201ENST00000415804 584 ntBASIC5.34□□□□□ -1.56
CLTCL1P53675 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.34□□□□□ -1.56
CLTCL1P53675 AC087650.1-201ENST00000431445 468 ntBASIC5.34□□□□□ -1.56
CLTCL1P53675 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.34□□□□□ -1.56
CLTCL1P53675 DEFB109D-201ENST00000529497 240 ntBASIC5.34□□□□□ -1.56
CLTCL1P53675 ZNF415P1-201ENST00000582279 1166 ntBASIC5.34□□□□□ -1.56
CLTCL1P53675 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.34□□□□□ -1.56
CLTCL1P53675 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.34□□□□□ -1.56
CLTCL1P53675 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.34□□□□□ -1.56
CLTCL1P53675 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CLTCL1P53675 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLTCL1P53675 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLTCL1P53675 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.33□□□□□ -1.56
CLTCL1P53675 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.33□□□□□ -1.56
CLTCL1P53675 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLTCL1P53675 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC5.33□□□□□ -1.56
CLTCL1P53675 DDX18P6-201ENST00000450119 1997 ntBASIC5.33□□□□□ -1.56
CLTCL1P53675 RN7SKP177-201ENST00000410567 355 ntBASIC5.33□□□□□ -1.56
CLTCL1P53675 RPL21P110-201ENST00000433345 446 ntBASIC5.33□□□□□ -1.56
CLTCL1P53675 AC069285.2-201ENST00000440210 275 ntBASIC5.33□□□□□ -1.56
CLTCL1P53675 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLTCL1P53675 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.33□□□□□ -1.56
CLTCL1P53675 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.33□□□□□ -1.56
CLTCL1P53675 SNORA70.17-201ENST00000516449 133 ntBASIC5.33□□□□□ -1.56
CLTCL1P53675 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.33□□□□□ -1.56
CLTCL1P53675 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.33□□□□□ -1.56
CLTCL1P53675 AC037471.2-201ENST00000564941 598 ntBASIC5.33□□□□□ -1.56
CLTCL1P53675 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.33□□□□□ -1.56
CLTCL1P53675 AC133552.5-201ENST00000604266 540 ntBASIC5.33□□□□□ -1.56
CLTCL1P53675 AC243756.2-201ENST00000618406 463 ntBASIC5.33□□□□□ -1.56
CLTCL1P53675 AC015722.2-201ENST00000622210 551 ntBASIC5.33□□□□□ -1.56
CLTCL1P53675 AC063952.1-203ENST00000634410 658 ntBASIC5.33□□□□□ -1.56
CLTCL1P53675 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.33□□□□□ -1.56
CLTCL1P53675 AC010300.1-201ENST00000600671 5134 ntBASIC5.32□□□□□ -1.56
CLTCL1P53675 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLTCL1P53675 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLTCL1P53675 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLTCL1P53675 AC097504.1-201ENST00000515103 2415 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms