Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AC097713.2-201ENST00000430199 356 ntBASIC5.72□□□□□ -1.49
KDM5CP41229 ATP5JP1-201ENST00000431631 322 ntBASIC5.72□□□□□ -1.49
KDM5CP41229 AP000563.1-201ENST00000490865 758 ntBASIC5.72□□□□□ -1.49
KDM5CP41229 RPL31P61-201ENST00000496160 376 ntBASIC5.72□□□□□ -1.49
KDM5CP41229 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.72□□□□□ -1.49
KDM5CP41229 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.72□□□□□ -1.49
KDM5CP41229 UBTFL9-201ENST00000534504 1148 ntBASIC5.72□□□□□ -1.49
KDM5CP41229 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KDM5CP41229 AC233702.9-201ENST00000581528 203 ntBASIC5.72□□□□□ -1.49
KDM5CP41229 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.72□□□□□ -1.49
KDM5CP41229 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.72□□□□□ -1.49
KDM5CP41229 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
KDM5CP41229 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KDM5CP41229 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KDM5CP41229 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
KDM5CP41229 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KDM5CP41229 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.71□□□□□ -1.5
KDM5CP41229 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.71□□□□□ -1.5
KDM5CP41229 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KDM5CP41229 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
KDM5CP41229 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.71□□□□□ -1.5
KDM5CP41229 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
KDM5CP41229 SNORD9-201ENST00000362566 104 ntBASIC5.71□□□□□ -1.5
KDM5CP41229 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KDM5CP41229 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KDM5CP41229 DPY19L1P2-201ENST00000426647 915 ntBASIC5.71□□□□□ -1.5
KDM5CP41229 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KDM5CP41229 RANP8-201ENST00000444720 713 ntBASIC5.71□□□□□ -1.5
KDM5CP41229 EIF4A1P11-201ENST00000451239 222 ntBASIC5.71□□□□□ -1.5
KDM5CP41229 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.71□□□□□ -1.5
KDM5CP41229 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.71□□□□□ -1.5
KDM5CP41229 RN7SKP289-201ENST00000517244 295 ntBASIC5.71□□□□□ -1.5
KDM5CP41229 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.71□□□□□ -1.5
KDM5CP41229 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.71□□□□□ -1.5
KDM5CP41229 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.71□□□□□ -1.5
KDM5CP41229 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.71□□□□□ -1.5
KDM5CP41229 MIMT1-201ENST00000597105 1050 ntBASIC5.71□□□□□ -1.5
KDM5CP41229 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.71□□□□□ -1.5
KDM5CP41229 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
KDM5CP41229 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KDM5CP41229 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.71□□□□□ -1.5
KDM5CP41229 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KDM5CP41229 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
KDM5CP41229 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
KDM5CP41229 SNORA3C-201ENST00000408792 125 ntBASIC5.7□□□□□ -1.5
KDM5CP41229 RBMY2UP-201ENST00000453474 324 ntBASIC5.7□□□□□ -1.5
KDM5CP41229 SNORD105B-201ENST00000458770 79 ntBASIC5.7□□□□□ -1.5
KDM5CP41229 RPL5P24-201ENST00000463742 885 ntBASIC5.7□□□□□ -1.5
KDM5CP41229 AC026784.1-201ENST00000507986 352 ntBASIC5.7□□□□□ -1.5
KDM5CP41229 STMN1P2-201ENST00000508435 439 ntBASIC5.7□□□□□ -1.5
KDM5CP41229 RAC1P2-201ENST00000511164 579 ntBASIC5.7□□□□□ -1.5
KDM5CP41229 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.7□□□□□ -1.5
KDM5CP41229 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.7□□□□□ -1.5
KDM5CP41229 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.7□□□□□ -1.5
KDM5CP41229 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.7□□□□□ -1.5
KDM5CP41229 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KDM5CP41229 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
KDM5CP41229 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KDM5CP41229 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.7□□□□□ -1.5
KDM5CP41229 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
KDM5CP41229 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KDM5CP41229 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KDM5CP41229 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
KDM5CP41229 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.69□□□□□ -1.5
KDM5CP41229 AC011742.1-201ENST00000431448 434 ntBASIC5.69□□□□□ -1.5
KDM5CP41229 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.69□□□□□ -1.5
KDM5CP41229 APOOP2-201ENST00000461561 539 ntBASIC5.69□□□□□ -1.5
KDM5CP41229 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.69□□□□□ -1.5
KDM5CP41229 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.69□□□□□ -1.5
KDM5CP41229 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KDM5CP41229 AC007823.1-201ENST00000569932 1566 ntBASIC5.69□□□□□ -1.5
KDM5CP41229 CDY11P-201ENST00000447168 1651 ntBASIC5.69□□□□□ -1.5
KDM5CP41229 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KDM5CP41229 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
KDM5CP41229 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KDM5CP41229 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
KDM5CP41229 MIR128-1-201ENST00000384921 82 ntBASIC5.68□□□□□ -1.5
KDM5CP41229 MIR1251-201ENST00000408552 70 ntBASIC5.68□□□□□ -1.5
KDM5CP41229 OR4K6P-201ENST00000416478 897 ntBASIC5.68□□□□□ -1.5
KDM5CP41229 AL391219.1-201ENST00000422570 483 ntBASIC5.68□□□□□ -1.5
KDM5CP41229 AC236972.1-201ENST00000433225 199 ntBASIC5.68□□□□□ -1.5
KDM5CP41229 HMGB1P37-201ENST00000439613 609 ntBASIC5.68□□□□□ -1.5
KDM5CP41229 SETD6P1-201ENST00000444575 317 ntBASIC5.68□□□□□ -1.5
KDM5CP41229 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.68□□□□□ -1.5
KDM5CP41229 CYCSP35-201ENST00000451978 304 ntBASIC5.68□□□□□ -1.5
KDM5CP41229 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.68□□□□□ -1.5
KDM5CP41229 AC006511.1-201ENST00000470614 315 ntBASIC5.68□□□□□ -1.5
KDM5CP41229 RN7SL271P-201ENST00000487601 295 ntBASIC5.68□□□□□ -1.5
KDM5CP41229 RPL23AP94-201ENST00000512518 302 ntBASIC5.68□□□□□ -1.5
KDM5CP41229 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.68□□□□□ -1.5
KDM5CP41229 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.68□□□□□ -1.5
KDM5CP41229 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
KDM5CP41229 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KDM5CP41229 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KDM5CP41229 MUC2-202ENST00000613187 4845 ntBASIC5.68□□□□□ -1.5
KDM5CP41229 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KDM5CP41229 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KDM5CP41229 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
KDM5CP41229 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KDM5CP41229 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms