Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL022393.1-201ENST00000625142 1677 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SLC6A4P31645 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SLC6A4P31645 MTCO1P7-201ENST00000419523 1542 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 AL353743.4-201ENST00000422653 1547 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 RNA5SP428-201ENST00000365129 132 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 Y_RNA.560-201ENST00000384689 102 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 RPS15AP38-201ENST00000413110 372 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC6A4P31645 AL139128.1-201ENST00000413921 941 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 DPPA2P2-201ENST00000418220 897 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 RBMY2KP-201ENST00000418221 992 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC6A4P31645 IFNNP1-201ENST00000429219 553 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 RPL7P4-203ENST00000430239 730 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 AC009238.2-201ENST00000431026 355 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC6A4P31645 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC6A4P31645 snoU13.20-201ENST00000459180 104 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 RN7SL443P-201ENST00000464331 290 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC6A4P31645 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 AL161747.1-201ENST00000480068 358 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.25□□□□□ -1.57
SLC6A4P31645 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.25□□□□□ -1.57
SLC6A4P31645 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.25□□□□□ -1.57
SLC6A4P31645 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.25□□□□□ -1.57
SLC6A4P31645 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC6A4P31645 TCP11X3P-202ENST00000514289 1254 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 RN7SKP260-201ENST00000516907 149 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC6A4P31645 RPL12P22-201ENST00000519073 490 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC6A4P31645 AP000676.2-201ENST00000529711 301 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC6A4P31645 AC007115.1-201ENST00000546853 234 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC6A4P31645 AC012213.3-201ENST00000577199 777 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 AC022884.2-201ENST00000578535 580 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC6A4P31645 AC080078.2-201ENST00000603766 501 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 RN7SKP299-201ENST00000606679 301 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 AL136981.2-201ENST00000617319 734 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC6A4P31645 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
SLC6A4P31645 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SLC6A4P31645 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SLC6A4P31645 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SLC6A4P31645 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 AC131971.1-201ENST00000332881 1482 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC6A4P31645 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SLC6A4P31645 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SLC6A4P31645 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC6A4P31645 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC6A4P31645 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC6A4P31645 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC6A4P31645 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SLC6A4P31645 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SLC6A4P31645 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC6A4P31645 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC6A4P31645 SNORA2.3-201ENST00000383920 135 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 RNU6-253P-201ENST00000384730 105 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 AL078599.1-201ENST00000402075 293 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 AL121978.1-201ENST00000402778 359 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 AL390316.1-201ENST00000406279 553 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 RPL12P9-201ENST00000412942 488 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC6A4P31645 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC6A4P31645 RPS3AP44-201ENST00000425466 790 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC6A4P31645 AL136231.1-201ENST00000429407 730 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC6A4P31645 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC6A4P31645 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC6A4P31645 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC6A4P31645 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC6A4P31645 AC093155.1-201ENST00000440164 826 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 AC092809.1-201ENST00000441469 474 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC6A4P31645 SEPT7P3-201ENST00000455017 621 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 RPS6P4-201ENST00000494693 758 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
SLC6A4P31645 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC6A4P31645 AC147055.4-201ENST00000504399 745 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 AC010350.1-201ENST00000504908 231 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 IGBP1P5-201ENST00000507524 1000 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 COX6B1P5-201ENST00000509843 249 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms