Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TRBV12-2-201ENST00000489763 344 ntBASIC3.88□□□□□ -1.79
HLA-DQB2P05538 PPM1AP1-201ENST00000502740 1135 ntBASIC3.88□□□□□ -1.79
HLA-DQB2P05538 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 RN7SKP34-201ENST00000516142 244 ntBASIC3.88□□□□□ -1.79
HLA-DQB2P05538 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 AC107021.2-201ENST00000567714 2095 ntBASIC3.88□□□□□ -1.79
HLA-DQB2P05538 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 HLFP1-201ENST00000402375 499 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 MTND4LP21-201ENST00000415303 295 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AL590609.2-201ENST00000421430 368 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 MTND2P25-201ENST00000449028 610 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AL121877.1-201ENST00000453704 622 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 FGF7P3-201ENST00000454645 303 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AL161747.1-201ENST00000480068 358 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 SYT14P1-201ENST00000481459 721 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AC068587.1-201ENST00000483613 781 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AC008802.1-201ENST00000519121 791 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 DUX4L52-201ENST00000549363 777 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AC087499.8-201ENST00000578406 226 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AL137849.1-201ENST00000604767 169 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AC026368.1-201ENST00000614934 690 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AC009704.2-201ENST00000618739 483 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AL158062.1-201ENST00000619632 745 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AC103858.2-201ENST00000621471 543 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AL354798.1-201ENST00000622505 329 ntBASIC3.87□□□□□ -1.79
HLA-DQB2P05538 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQB2P05538 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 GCNT6-201ENST00000379591 934 ntBASIC3.86□□□□□ -1.79
HLA-DQB2P05538 MIR30B-201ENST00000384850 88 ntBASIC3.86□□□□□ -1.79
HLA-DQB2P05538 SOD2P1-201ENST00000396543 562 ntBASIC3.86□□□□□ -1.79
HLA-DQB2P05538 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 AC010740.1-201ENST00000417035 684 ntBASIC3.86□□□□□ -1.79
HLA-DQB2P05538 USP12PY-201ENST00000427677 1064 ntBASIC3.86□□□□□ -1.79
HLA-DQB2P05538 AF228730.2-201ENST00000438784 848 ntBASIC3.86□□□□□ -1.79
HLA-DQB2P05538 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 VN1R85P-201ENST00000601587 426 ntBASIC3.86□□□□□ -1.79
HLA-DQB2P05538 SNORA62.6-201ENST00000606322 83 ntBASIC3.86□□□□□ -1.79
HLA-DQB2P05538 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 AC091905.1-201ENST00000624400 311 ntBASIC3.86□□□□□ -1.79
HLA-DQB2P05538 CDRT1-208ENST00000630868 794 ntBASIC3.86□□□□□ -1.79
HLA-DQB2P05538 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQB2P05538 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC019155.1-201ENST00000382242 574 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 ZNF602P-201ENST00000405929 924 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 CASKP1-201ENST00000412870 582 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 OR5AW1P-201ENST00000426334 1006 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 EIF2S2P3-201ENST00000428356 999 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC092809.1-201ENST00000441469 474 ntBASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DQB2P05538 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms