Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SNRPFP1-201ENST00000414761 252 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 AC234782.4-201ENST00000417646 1048 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.09□□□□□ -1.75
MT-ND1P03886 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 RWDD4P2-201ENST00000426392 563 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 AL512637.2-201ENST00000431287 1256 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.09□□□□□ -1.75
MT-ND1P03886 AL049745.1-201ENST00000433953 286 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 FTH1P16-201ENST00000435241 552 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 ACTR3P2-201ENST00000439585 1257 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 RPL23AP43-201ENST00000446445 471 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 GXYLT1P1-201ENST00000446657 490 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 HMGN1P5-201ENST00000448591 263 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 RPS3AP53-201ENST00000454716 778 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.09□□□□□ -1.75
MT-ND1P03886 IGLV2-34-201ENST00000490007 283 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 RNU6-334P-201ENST00000517072 102 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 IGKV1-32-201ENST00000519290 311 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.09□□□□□ -1.75
MT-ND1P03886 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.09□□□□□ -1.75
MT-ND1P03886 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.09□□□□□ -1.75
MT-ND1P03886 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.09□□□□□ -1.75
MT-ND1P03886 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.09□□□□□ -1.75
MT-ND1P03886 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.09□□□□□ -1.75
MT-ND1P03886 AC025918.2-201ENST00000558683 763 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.09□□□□□ -1.75
MT-ND1P03886 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.09□□□□□ -1.75
MT-ND1P03886 AF230666.2-201ENST00000602328 725 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.09□□□□□ -1.75
MT-ND1P03886 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 BNIP3P31-201ENST00000604515 566 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 MIR432-201ENST00000606207 94 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.09□□□□□ -1.75
MT-ND1P03886 MIR8084-201ENST00000614105 89 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 AC090510.2-201ENST00000617465 629 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 AC019278.1-201ENST00000623516 479 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.09□□□□□ -1.75
MT-ND1P03886 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.09□□□□□ -1.75
MT-ND1P03886 MIR6715B-201ENST00000637172 77 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MT-ND1P03886 AC010928.1-201ENST00000592477 1447 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.09□□□□□ -1.75
MT-ND1P03886 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
MT-ND1P03886 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
MT-ND1P03886 AC090229.1-201ENST00000590983 1609 ntBASIC4.09□□□□□ -1.76
MT-ND1P03886 A2MP1-204ENST00000566278 4130 ntBASIC4.09□□□□□ -1.76
MT-ND1P03886 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
MT-ND1P03886 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
MT-ND1P03886 AC022031.1-201ENST00000585985 2593 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
MT-ND1P03886 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.08□□□□□ -1.76
MT-ND1P03886 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MT-ND1P03886 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MT-ND1P03886 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MT-ND1P03886 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MT-ND1P03886 ATP5F1P2-201ENST00000398143 760 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AL035405.1-201ENST00000400795 710 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AP000357.1-201ENST00000409926 1165 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 RNU2-17P-201ENST00000410290 190 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AL450992.3-201ENST00000413192 568 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 TCEA1P4-201ENST00000415066 844 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AL158050.1-201ENST00000416077 457 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 LINC01347-201ENST00000417964 355 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MT-ND1P03886 MTND2P9-201ENST00000422293 931 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AC104837.2-201ENST00000427236 424 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 MRPL50P1-201ENST00000431951 384 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AC008072.1-201ENST00000434254 824 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.08□□□□□ -1.76
MT-ND1P03886 PTMAP6-201ENST00000439110 327 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.08□□□□□ -1.76
MT-ND1P03886 AC097499.1-201ENST00000444277 208 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AL451050.1-201ENST00000450126 415 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 RPL23AP23-201ENST00000452590 471 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.08□□□□□ -1.76
MT-ND1P03886 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.08□□□□□ -1.76
MT-ND1P03886 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MT-ND1P03886 FTH1P24-201ENST00000503502 462 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AC108145.1-201ENST00000503770 153 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AC139783.2-201ENST00000504847 1145 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AC008638.1-201ENST00000506035 866 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.08□□□□□ -1.76
MT-ND1P03886 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.08□□□□□ -1.76
MT-ND1P03886 PARP4P3-201ENST00000510265 317 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.08□□□□□ -1.76
MT-ND1P03886 HNRNPKP5-201ENST00000515300 253 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 RNA5SP497-201ENST00000516081 97 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.08□□□□□ -1.76
MT-ND1P03886 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.08□□□□□ -1.76
MT-ND1P03886 C1DP5-201ENST00000525775 383 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MT-ND1P03886 BRD9P1-201ENST00000529855 560 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AC025260.1-201ENST00000548858 430 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.08□□□□□ -1.76
MT-ND1P03886 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.08□□□□□ -1.76
MT-ND1P03886 AC044860.2-201ENST00000561005 179 ntBASIC4.08□□□□□ -1.76
MT-ND1P03886 AC093510.2-201ENST00000562820 896 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms