Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.78□□□□□ -1.64
SMAD6O43541 AC119751.6-201ENST00000416712 186 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.78□□□□□ -1.64
SMAD6O43541 AC140479.3-201ENST00000418944 1126 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 MFSD13B-201ENST00000420133 1290 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 RPL7P57-201ENST00000423238 740 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 EIF4HP2-201ENST00000424380 563 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.78□□□□□ -1.64
SMAD6O43541 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.78□□□□□ -1.64
SMAD6O43541 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.78□□□□□ -1.64
SMAD6O43541 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMAD6O43541 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SMAD6O43541 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.78□□□□□ -1.64
SMAD6O43541 RPS3AP22-201ENST00000488297 769 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.78□□□□□ -1.64
SMAD6O43541 RPL21P131-201ENST00000497298 483 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.78□□□□□ -1.64
SMAD6O43541 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.78□□□□□ -1.64
SMAD6O43541 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.78□□□□□ -1.64
SMAD6O43541 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.78□□□□□ -1.64
SMAD6O43541 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.78□□□□□ -1.64
SMAD6O43541 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.78□□□□□ -1.64
SMAD6O43541 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
SMAD6O43541 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.78□□□□□ -1.64
SMAD6O43541 AC010306.1-201ENST00000523223 1117 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 AP003717.3-201ENST00000544832 1180 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 CYB5AP5-201ENST00000549779 389 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.78□□□□□ -1.64
SMAD6O43541 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.78□□□□□ -1.64
SMAD6O43541 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 AC121247.2-201ENST00000604776 136 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 AC073137.1-201ENST00000605636 634 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SMAD6O43541 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.78□□□□□ -1.64
SMAD6O43541 AC022306.2-201ENST00000617563 647 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 AC015804.1-201ENST00000622935 435 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 AP002782.1-201ENST00000623107 614 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 AC090897.3-201ENST00000636973 1157 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMAD6O43541 MAPK10-263ENST00000641052 4307 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SMAD6O43541 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SMAD6O43541 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMAD6O43541 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMAD6O43541 AC009229.4-201ENST00000623854 1947 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SMAD6O43541 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SMAD6O43541 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.77□□□□□ -1.65
SMAD6O43541 Z95327.2-201ENST00000414579 1873 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 AL445437.1-201ENST00000623157 3087 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SMAD6O43541 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMAD6O43541 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SMAD6O43541 ZNF876P-202ENST00000398732 1485 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.77□□□□□ -1.65
SMAD6O43541 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMAD6O43541 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMAD6O43541 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
SMAD6O43541 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SMAD6O43541 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMAD6O43541 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SMAD6O43541 RNU6-1214P-201ENST00000363650 109 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SMAD6O43541 SNORA70F-201ENST00000384142 135 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 GLULP6-201ENST00000399502 913 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 AL603865.2-201ENST00000401679 213 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 U3.35-201ENST00000408405 208 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 TMBIM7P-201ENST00000418074 855 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 HMGB1P49-201ENST00000418882 569 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.77□□□□□ -1.65
SMAD6O43541 AL365396.1-201ENST00000430854 671 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 MTCO1P43-201ENST00000431831 488 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.77□□□□□ -1.65
SMAD6O43541 ELOCP30-201ENST00000447108 299 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.77□□□□□ -1.65
SMAD6O43541 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.77□□□□□ -1.65
SMAD6O43541 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.77□□□□□ -1.65
SMAD6O43541 NDUFA12P1-201ENST00000455914 406 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 ATG12P2-201ENST00000456830 416 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.77□□□□□ -1.65
SMAD6O43541 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.77□□□□□ -1.65
SMAD6O43541 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.77□□□□□ -1.65
SMAD6O43541 AC105918.1-201ENST00000474399 838 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.77□□□□□ -1.65
SMAD6O43541 TPT1P3-201ENST00000492841 512 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SMAD6O43541 HMGB1P3-201ENST00000502802 616 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 PRELID3BP7-201ENST00000503606 469 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.77□□□□□ -1.65
SMAD6O43541 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.77□□□□□ -1.65
SMAD6O43541 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.77□□□□□ -1.65
SMAD6O43541 SNORA3.4-201ENST00000515969 96 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 RNA5SP249-201ENST00000516127 99 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.77□□□□□ -1.65
SMAD6O43541 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.77□□□□□ -1.65
SMAD6O43541 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SMAD6O43541 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.77□□□□□ -1.65
SMAD6O43541 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.77□□□□□ -1.65
SMAD6O43541 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms