Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC124312.4-201ENST00000605533 310 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 AC006270.3-201ENST00000605967 1036 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 AC126175.1-201ENST00000617041 758 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 AL136981.2-201ENST00000617319 734 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 AC091931.1-201ENST00000623488 728 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.12□□□□□ -1.59
PHGDHO43175 AC073869.10-201ENST00000642016 354 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PHGDHO43175 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.12□□□□□ -1.59
PHGDHO43175 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PHGDHO43175 AC087359.1-201ENST00000508335 1740 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PHGDHO43175 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PHGDHO43175 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PHGDHO43175 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
PHGDHO43175 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PHGDHO43175 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.11□□□□□ -1.59
PHGDHO43175 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PHGDHO43175 XPOTP1-201ENST00000443317 2398 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PHGDHO43175 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PHGDHO43175 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.11□□□□□ -1.59
PHGDHO43175 AL391994.1-201ENST00000254724 282 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 Y_RNA.25-201ENST00000362528 102 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 RNU6-553P-201ENST00000364047 96 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PHGDHO43175 RNU6-253P-201ENST00000384730 105 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.11□□□□□ -1.59
PHGDHO43175 RNA5SP178-201ENST00000410380 128 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 AC068533.2-201ENST00000411872 306 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 SETP15-201ENST00000412724 337 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 RBMY2KP-201ENST00000418221 992 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 AC008280.1-201ENST00000418851 412 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 AC104333.2-201ENST00000422630 192 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 EI24P4-201ENST00000423683 1078 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 AC009238.2-201ENST00000431026 355 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 ARL4AP3-201ENST00000441452 574 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.11□□□□□ -1.59
PHGDHO43175 AC016724.1-201ENST00000453215 421 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 PPIAP21-201ENST00000464473 501 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 AL133445.1-201ENST00000467051 452 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 PPIAP19-201ENST00000486414 492 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 XKRY-201ENST00000510392 1100 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 OR5BM1P-201ENST00000512021 366 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 MTCO1P49-201ENST00000523429 802 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 OR5AK1P-201ENST00000524837 922 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PHGDHO43175 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.11□□□□□ -1.59
PHGDHO43175 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.11□□□□□ -1.59
PHGDHO43175 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.11□□□□□ -1.59
PHGDHO43175 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.11□□□□□ -1.59
PHGDHO43175 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.11□□□□□ -1.59
PHGDHO43175 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PHGDHO43175 MIR3614-201ENST00000581261 86 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.11□□□□□ -1.59
PHGDHO43175 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.11□□□□□ -1.59
PHGDHO43175 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.11□□□□□ -1.59
PHGDHO43175 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.11□□□□□ -1.59
PHGDHO43175 AC004948.1-201ENST00000609858 672 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 AC245297.2-201ENST00000610119 565 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 AC009090.3-201ENST00000616553 565 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 AC026124.2-201ENST00000621847 656 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.11□□□□□ -1.59
PHGDHO43175 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.11□□□□□ -1.59
PHGDHO43175 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.11□□□□□ -1.59
PHGDHO43175 AC074101.1-201ENST00000637861 241 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PHGDHO43175 AC120338.1-201ENST00000625074 1541 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PHGDHO43175 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.11□□□□□ -1.59
PHGDHO43175 AC107081.3-201ENST00000612715 2034 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 AC093849.1-201ENST00000563631 2209 ntBASIC5.11□□□□□ -1.59
PHGDHO43175 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PHGDHO43175 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
PHGDHO43175 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PHGDHO43175 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PHGDHO43175 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PHGDHO43175 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PHGDHO43175 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PHGDHO43175 SNORA17A-201ENST00000391185 133 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AL589647.1-201ENST00000402485 466 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 Z98755.1-201ENST00000407015 1384 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.1□□□□□ -1.59
PHGDHO43175 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.1□□□□□ -1.59
PHGDHO43175 TIMM9P2-201ENST00000419324 266 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.1□□□□□ -1.59
PHGDHO43175 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.1□□□□□ -1.59
PHGDHO43175 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PHGDHO43175 IPMKP1-201ENST00000425988 855 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.1□□□□□ -1.59
PHGDHO43175 AL389925.1-201ENST00000432257 728 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.1□□□□□ -1.59
PHGDHO43175 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.1□□□□□ -1.59
PHGDHO43175 AL445523.1-201ENST00000451184 1362 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PHGDHO43175 AC235565.1-201ENST00000456962 1325 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 NCOR1P1-202ENST00000486162 291 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 RN7SL184P-201ENST00000488308 297 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms