Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MTND4LP25-201ENST00000570218 163 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 RN7SL690P-201ENST00000582087 240 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.21□□□□□ -1.74
SLC28A1O00337 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC28A1O00337 AC013244.1-201ENST00000604279 193 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 AL031666.3-201ENST00000609320 1006 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 FRG1HP-204ENST00000617940 757 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 AC073569.3-201ENST00000619055 682 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC28A1O00337 AP005019.3-201ENST00000620418 560 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 AL049536.1-201ENST00000625043 744 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SLC28A1O00337 AC068254.2-201ENST00000623938 3577 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC28A1O00337 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC28A1O00337 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SLC28A1O00337 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC28A1O00337 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC28A1O00337 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC28A1O00337 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
SLC28A1O00337 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
SLC28A1O00337 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC28A1O00337 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC28A1O00337 ENSAP3-201ENST00000312710 333 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
SLC28A1O00337 SNORA70F-201ENST00000384142 135 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC28A1O00337 SNRPFP1-201ENST00000414761 252 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 AL161631.1-201ENST00000417933 486 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC28A1O00337 UQCRBP1-201ENST00000421129 336 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 EIF1P3-201ENST00000423841 334 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 RPL30P3-201ENST00000424262 333 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC28A1O00337 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC28A1O00337 MTCO1P43-201ENST00000431831 488 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SLC28A1O00337 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC28A1O00337 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 CEACAMP6-201ENST00000452007 574 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC28A1O00337 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC28A1O00337 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC28A1O00337 SETP6-201ENST00000479329 568 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC28A1O00337 MTCO2P9-201ENST00000503214 694 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 FTH1P24-201ENST00000503502 462 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC28A1O00337 AC008565.1-201ENST00000509046 885 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 PARP4P3-201ENST00000510265 317 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC28A1O00337 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC28A1O00337 IFITM8P-201ENST00000522529 394 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 AC083923.1-201ENST00000523708 376 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 OR5M7P-201ENST00000526140 972 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC28A1O00337 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.2□□□□□ -1.74
SLC28A1O00337 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC28A1O00337 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
SLC28A1O00337 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC28A1O00337 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC28A1O00337 NTAN1P1-201ENST00000603150 646 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 AC005776.1-201ENST00000603164 290 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 AC079587.1-201ENST00000603846 277 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 AC010857.1-201ENST00000606398 594 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 AC138907.10-201ENST00000623708 983 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 FP325313.1-201ENST00000638228 703 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SLC28A1O00337 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC28A1O00337 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC28A1O00337 AC007529.1-201ENST00000418574 2178 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC28A1O00337 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC28A1O00337 NOL8P1-201ENST00000508336 3529 ntBASIC4.2□□□□□ -1.74
SLC28A1O00337 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC28A1O00337 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC28A1O00337 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC28A1O00337 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SLC28A1O00337 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SLC28A1O00337 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC28A1O00337 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC28A1O00337 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SLC28A1O00337 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC28A1O00337 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC28A1O00337 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SLC28A1O00337 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SLC28A1O00337 SNORD66.1-201ENST00000391230 76 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.19□□□□□ -1.74
SLC28A1O00337 AC092745.2-202ENST00000411880 369 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC28A1O00337 MTND2P15-201ENST00000418575 892 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 MTND2P11-201ENST00000423638 648 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 UBE2D3P3-201ENST00000426992 425 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC28A1O00337 RPL35AP15-201ENST00000468042 339 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 CYCSP20-201ENST00000473154 315 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.19□□□□□ -1.74
SLC28A1O00337 RNU6-467P-201ENST00000517027 110 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 RN7SKP283-201ENST00000517197 270 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 AC022790.1-201ENST00000522872 204 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms