Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 RNA5SP130-201ENST00000364431 114 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 RNA5SP283-201ENST00000365604 119 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 VDAC1P9-201ENST00000412766 841 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 RPS12P5-201ENST00000423449 371 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 AP000949.1-201ENST00000438328 629 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 RPL23AP65-201ENST00000475608 468 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 RNU6-1308P-201ENST00000516817 103 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 HAUS1P3-201ENST00000523909 662 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 AC004923.2-201ENST00000529649 369 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 OR8X1P-201ENST00000534542 869 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 RNU4-89P-201ENST00000607443 133 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 MIR1264-201ENST00000616374 69 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 AL158196.1-201ENST00000616786 434 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 AL445493.3-201ENST00000619568 477 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 AL161637.1-201ENST00000622380 412 ntBASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NEDD8-MDP1E9PL57 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.34□□□□□ -1.72
NEDD8-MDP1E9PL57 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 HSPA8P17-201ENST00000427029 1382 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 RNU1-64P-201ENST00000365443 163 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 OR6K3-202ENST00000368146 996 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 RNU11-4P-201ENST00000391149 133 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 SNORD66.1-201ENST00000391230 76 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AL034374.1-201ENST00000406329 351 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 RN7SKP167-201ENST00000411047 285 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 OR8G2P-201ENST00000412796 908 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AC009237.10-201ENST00000414112 510 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AL117339.2-201ENST00000430475 180 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 MTCYBP12-201ENST00000440559 1134 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AL162151.2-201ENST00000448875 158 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AC010468.3-201ENST00000508225 458 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AC108120.2-201ENST00000512973 294 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AC027338.1-201ENST00000514840 825 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 MTND1P36-201ENST00000522384 936 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AC122134.1-201ENST00000565664 1104 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 ZNF92P2-201ENST00000600543 1059 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AC090617.9-201ENST00000623751 147 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AC010608.2-201ENST00000624830 470 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 EOGT-210ENST00000615922 1931 ntBASIC4.33□□□□□ -1.72
NEDD8-MDP1E9PL57 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 RLIMP1-201ENST00000339626 1680 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 IQCB2P-201ENST00000401788 1633 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 RNA5SP388-201ENST00000362584 119 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms