Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 MIR5096-201ENST00000583713 70 ntBASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 MTCO2P2-201ENST00000591258 225 ntBASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 AL022067.1-201ENST00000602426 454 ntBASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 RPP40P2-201ENST00000603596 712 ntBASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 AC068313.1-201ENST00000604028 1008 ntBASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 SUMO2P14-201ENST00000604488 293 ntBASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 AC139713.2-214ENST00000642059 1811 ntBASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SNX9Q9Y5X1 MAPK10-286ENST00000641208 8747 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 IGKV7-3-201ENST00000357453 298 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC016397.1-201ENST00000412463 242 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 PNRC2P1-201ENST00000423940 420 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AL158073.1-201ENST00000426848 1104 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 MTCO3P21-201ENST00000430791 643 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 RPS26P2-201ENST00000440331 348 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 EXOSC3P1-201ENST00000448649 500 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC009220.1-201ENST00000451614 275 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 CCDC75P1-201ENST00000469247 791 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC068587.2-201ENST00000478386 781 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC013356.1-201ENST00000489027 564 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 UBA52P3-201ENST00000491303 382 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AF186190.1-201ENST00000517470 480 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 RPL26P30-202ENST00000602923 645 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC115286.1-201ENST00000604298 434 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC099785.1-201ENST00000605697 437 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC245100.7-201ENST00000609678 442 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AC116447.1-201ENST00000613153 453 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 AL158196.1-201ENST00000616786 434 ntBASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX9Q9Y5X1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 ZNF29P-201ENST00000225587 168 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 RNA5SP447-201ENST00000363749 119 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 HMGB1P10-201ENST00000395823 563 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 ATF1P1-201ENST00000406040 927 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC010385.1-201ENST00000412374 256 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 EIF4A1P1-201ENST00000420241 934 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 Z74021.1-201ENST00000423610 407 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 CYCSP34-201ENST00000458172 304 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 AC112206.1-201ENST00000468416 477 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 RN7SL481P-201ENST00000477764 299 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 METTL15P1-201ENST00000481421 1045 ntBASIC4.84□□□□□ -1.63
SNX9Q9Y5X1 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms