Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
PCDHB7Q9Y5E2 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB7Q9Y5E2 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHB7Q9Y5E2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB7Q9Y5E2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 FAM3C2-201ENST00000312214 681 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 SNORA71.2-201ENST00000364941 134 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 MIR525-201ENST00000384978 85 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 MTND4P13-201ENST00000402078 1023 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AL592293.2-201ENST00000422292 996 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 RSL24D1P6-201ENST00000426934 401 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 RPS26P30-201ENST00000443431 335 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AL929288.2-201ENST00000446368 407 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AC005002.1-201ENST00000447458 540 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 RPS4XP12-201ENST00000461747 709 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AC011037.1-201ENST00000483964 558 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AL049874.2-201ENST00000492636 288 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 RN7SKP122-201ENST00000515923 296 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 MRPS36P3-201ENST00000519284 130 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AC023813.2-201ENST00000564321 469 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AC093249.4-201ENST00000564755 259 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 VN1R88P-201ENST00000596787 292 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AL020997.3-201ENST00000602843 359 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AC016877.3-201ENST00000606778 504 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AC100847.1-201ENST00000611316 481 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 LINC02211-204ENST00000642024 1070 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AP005432.1-201ENST00000580891 3485 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 MTND4P10-201ENST00000446199 1363 ntBASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB7Q9Y5E2 AC011447.7-201ENST00000624228 1590 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AL049545.1-201ENST00000401856 572 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 MTCO2P31-201ENST00000402702 684 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 RPL21P67-201ENST00000402896 478 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AL590290.1-201ENST00000405336 380 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 Z75741.2-201ENST00000417272 1167 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AC010099.3-201ENST00000423896 409 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 RPF2P1-201ENST00000424137 906 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 RPL12P34-201ENST00000424532 479 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 FTLP19-201ENST00000433300 394 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 PRPF38AP1-201ENST00000451976 933 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AC009963.2-201ENST00000453431 138 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AC079168.2-201ENST00000453977 416 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AC091959.2-201ENST00000477363 321 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AC083829.1-201ENST00000503756 657 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AC119751.5-201ENST00000514077 770 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AC018442.3-201ENST00000523025 183 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AP001781.1-201ENST00000530977 207 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 MRPS36P5-201ENST00000551909 298 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AL359219.2-201ENST00000555184 348 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 NPM1P47-201ENST00000560843 856 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AC084783.1-201ENST00000565846 910 ntBASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB7Q9Y5E2 AC055764.2-201ENST00000610089 670 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms