Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC139493.1-201ENST00000604368 397 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 HMGN2P28-201ENST00000606102 262 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC135050.6-202ENST00000613584 392 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 MIR6726-201ENST00000613751 61 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 KARSP2-201ENST00000415696 1639 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 RNU6-179P-201ENST00000363350 107 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 RNA5SP260-201ENST00000363849 111 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 U3.11-201ENST00000364476 212 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC097374.1-203ENST00000400783 485 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 RN7SKP126-201ENST00000411143 300 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC016027.5-201ENST00000427227 210 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC073900.1-201ENST00000429766 776 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AL031584.1-201ENST00000447169 754 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AL136981.1-203ENST00000451452 3844 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 NDUFB4P10-201ENST00000452541 359 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC013429.1-201ENST00000456604 422 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 OR7E62P-201ENST00000456741 477 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 RN7SL516P-201ENST00000496127 297 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 RNU6-1334P-201ENST00000516032 105 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 RNU7-200P-201ENST00000516105 62 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC087360.1-201ENST00000518788 616 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 IGKV2D-10-201ENST00000520194 281 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC007991.1-201ENST00000522680 631 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 OR7E1P-201ENST00000533891 958 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AP001858.2-201ENST00000536213 601 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 COX6CP11-201ENST00000555293 229 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC015801.1-201ENST00000585651 153 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 RPS27AP19-201ENST00000597285 458 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 uc_338.21-201ENST00000622458 147 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AC027559.1-201ENST00000636288 271 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AL359893.1-201ENST00000447628 1580 ntBASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
VPS9D1Q9Y2B5 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
VPS9D1Q9Y2B5 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
VPS9D1Q9Y2B5 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
VPS9D1Q9Y2B5 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.24
VPS9D1Q9Y2B5 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.27□□□□□ -1.25
VPS9D1Q9Y2B5 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms