Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 RN7SKP283-201ENST00000517197 270 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AC087897.1-201ENST00000550134 156 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 A2MP1-204ENST00000566278 4130 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 RN7SL339P-201ENST00000580597 296 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AC009948.4-201ENST00000604692 675 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 CYCSP41-201ENST00000616920 296 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AC018926.3-201ENST00000618841 406 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AL359757.1-201ENST00000623176 255 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AC109454.4-201ENST00000623411 649 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AL596275.2-204ENST00000641628 552 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AL596275.2-206ENST00000641957 626 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AC119744.1-201ENST00000454746 1715 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 RNU6-353P-201ENST00000364266 108 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AL049693.1-201ENST00000402760 611 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 RN7SKP247-201ENST00000411094 308 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 RPS27AP7-201ENST00000422792 455 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AC009238.2-201ENST00000431026 355 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 BX323845.1-201ENST00000432417 179 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 NRBF2P3-201ENST00000432731 865 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 MTCYBP15-201ENST00000433123 1127 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AC005002.1-201ENST00000447458 540 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 EIF4A1P11-201ENST00000451239 222 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AURKAPS2-201ENST00000454983 333 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AC093166.2-201ENST00000455969 1017 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 RNU7-140P-201ENST00000459546 60 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 CCDC75P1-201ENST00000469247 791 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AC022795.1-201ENST00000473808 480 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 GTF2IP9-201ENST00000502460 301 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 UBE2V1P12-201ENST00000503954 474 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AC096571.1-202ENST00000506634 735 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 RNU6-415P-201ENST00000516252 97 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 HMGB1P23-201ENST00000518743 568 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 NDUFS5P6-201ENST00000529136 295 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 TVP23CP2-201ENST00000571473 623 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 MIR4509-3-201ENST00000578671 94 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 RN7SL690P-201ENST00000582087 240 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 MIR4509-2-201ENST00000583920 94 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AC097505.1-201ENST00000610199 565 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 MIR4509-1-201ENST00000618224 94 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 BX649567.1-201ENST00000642071 1134 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 AC106754.1-201ENST00000562632 1513 ntBASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
POLR1BQ9H9Y6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.74□□□□□ -1.65
POLR1BQ9H9Y6 CASC19-204ENST00000641001 2055 ntBASIC4.74□□□□□ -1.65
POLR1BQ9H9Y6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
POLR1BQ9H9Y6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
POLR1BQ9H9Y6 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.74□□□□□ -1.65
POLR1BQ9H9Y6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
POLR1BQ9H9Y6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
POLR1BQ9H9Y6 KARSP3-201ENST00000571212 1504 ntBASIC4.74□□□□□ -1.65
POLR1BQ9H9Y6 AL512646.1-201ENST00000269395 1077 ntBASIC4.74□□□□□ -1.65
POLR1BQ9H9Y6 OR4K15-201ENST00000305051 1216 ntBASIC4.74□□□□□ -1.65
POLR1BQ9H9Y6 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.74□□□□□ -1.65
POLR1BQ9H9Y6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
POLR1BQ9H9Y6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms