Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC146944.2-203ENST00000502493 354 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX3Q99909 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX3Q99909 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.06□□□□□ -1.76
SSX3Q99909 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX3Q99909 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSX3Q99909 AC139495.1-202ENST00000513164 354 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX3Q99909 HMGB1P1-201ENST00000522557 636 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX3Q99909 RPL21P7-201ENST00000557463 483 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX3Q99909 RN7SL622P-201ENST00000585292 275 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX3Q99909 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX3Q99909 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX3Q99909 AC068790.5-201ENST00000602741 355 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 MEMO1P5-201ENST00000604810 406 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC100827.5-201ENST00000615883 426 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC006065.5-201ENST00000623427 349 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 AC112694.2-201ENST00000623697 768 ntBASIC4.06□□□□□ -1.76
SSX3Q99909 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX3Q99909 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSX3Q99909 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSX3Q99909 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX3Q99909 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSX3Q99909 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX3Q99909 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX3Q99909 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSX3Q99909 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSX3Q99909 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSX3Q99909 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX3Q99909 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSX3Q99909 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSX3Q99909 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
SSX3Q99909 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SSX3Q99909 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.05□□□□□ -1.76
SSX3Q99909 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 AC108751.5-201ENST00000492880 1336 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 IRF5P1-201ENST00000504852 2164 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 RNU6-468P-201ENST00000384003 109 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 SNORA70E-201ENST00000384492 135 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 AL035405.1-201ENST00000400795 710 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 PRRC2CP1-201ENST00000404428 159 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 U3.32-201ENST00000408116 212 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 RNU2-21P-201ENST00000410368 188 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.05□□□□□ -1.76
SSX3Q99909 CYP4F29P-201ENST00000420685 446 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX3Q99909 FO393414.1-201ENST00000428697 1184 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 SKP1P3-201ENST00000429280 487 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 YWHAEP5-201ENST00000431545 765 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX3Q99909 BX323845.1-201ENST00000432417 179 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 HMGN1P5-201ENST00000448591 263 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX3Q99909 AL356981.1-201ENST00000454879 684 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.05□□□□□ -1.76
SSX3Q99909 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.05□□□□□ -1.76
SSX3Q99909 snoU13.7-201ENST00000459220 104 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 AC108751.2-201ENST00000469993 231 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.05□□□□□ -1.76
SSX3Q99909 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.05□□□□□ -1.76
SSX3Q99909 Vault.1-201ENST00000516474 102 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 RNA5SP43-201ENST00000516559 110 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 RN7SKP277-201ENST00000516895 283 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.05□□□□□ -1.76
SSX3Q99909 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX3Q99909 MTND2P26-201ENST00000528255 1029 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.05□□□□□ -1.76
SSX3Q99909 AC008033.2-201ENST00000542626 177 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.05□□□□□ -1.76
SSX3Q99909 AL352979.3-201ENST00000553515 247 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.05□□□□□ -1.76
SSX3Q99909 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.05□□□□□ -1.76
SSX3Q99909 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.05□□□□□ -1.76
SSX3Q99909 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.05□□□□□ -1.76
SSX3Q99909 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX3Q99909 MIR4480-201ENST00000582492 71 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 AC103792.1-201ENST00000603591 919 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 AP005432.2-201ENST00000608162 586 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 AC140113.4-201ENST00000622087 222 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.05□□□□□ -1.76
SSX3Q99909 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 AC017104.5-201ENST00000637647 639 ntBASIC4.05□□□□□ -1.76
SSX3Q99909 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX3Q99909 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.05□□□□□ -1.76
SSX3Q99909 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX3Q99909 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms