Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LRCH3Q96II8 ZNF101P1-201ENST00000435701 1720 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC7.43□□□□□ -1.22
LRCH3Q96II8 AC093775.1-201ENST00000624154 1868 ntBASIC7.43□□□□□ -1.22
LRCH3Q96II8 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 AC121333.1-201ENST00000567488 2709 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 SNORD50B-201ENST00000364995 70 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 MIR454-201ENST00000390180 115 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 MIR1302-6-201ENST00000408466 90 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 DNAJC19P7-201ENST00000428811 344 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 RPS15AP10-201ENST00000432472 382 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 AL161636.2-201ENST00000445179 927 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 AC004980.3-201ENST00000447046 365 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 RN7SL610P-201ENST00000463845 291 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 RPS15AP17-201ENST00000470598 390 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 RPS23P1-201ENST00000491662 432 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 Y_RNA.654-201ENST00000497848 106 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 TMEM251P1-201ENST00000503717 318 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 HMGN1P9-201ENST00000515212 298 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 Y_RNA.673-201ENST00000516306 88 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 Y_RNA.700-201ENST00000516806 100 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 IGHV3-76-201ENST00000522465 295 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 IGLVV-66-201ENST00000523818 341 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 MIR4437-201ENST00000581331 60 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 AC023043.2-201ENST00000589678 1026 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 Z82243.1-201ENST00000609432 473 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 AC025162.2-201ENST00000619602 560 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 AC129915.3-201ENST00000634128 948 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
LRCH3Q96II8 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 SHQ1P1-201ENST00000437111 1544 ntBASIC7.42□□□□□ -1.22
LRCH3Q96II8 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LRCH3Q96II8 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 AL139276.1-201ENST00000311910 1001 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 SNORD3E-201ENST00000362899 217 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 RNU6-490P-201ENST00000362985 107 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 RNU6-853P-201ENST00000364306 107 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 Y_RNA.270-201ENST00000364693 104 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 RNU6-593P-201ENST00000364716 112 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 OR52E6-202ENST00000379946 954 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 Y_RNA.485-201ENST00000384395 102 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 RNU6-328P-201ENST00000390887 106 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 U3.25-201ENST00000391209 220 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 AL360182.1-201ENST00000397433 468 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 RPL21P1-201ENST00000399532 476 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 TPMTP2-201ENST00000414372 726 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 UBE2V1P14-201ENST00000415815 558 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 AL645936.1-201ENST00000441979 518 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 AC020550.1-201ENST00000447385 163 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 AC005008.1-201ENST00000456151 612 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 RPL39P38-201ENST00000467018 153 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 AP001025.2-201ENST00000490908 477 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 AC034222.1-201ENST00000494052 532 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 Y_RNA.703-201ENST00000516846 111 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 SNORD116.3-201ENST00000517176 78 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 AC090136.1-201ENST00000520009 240 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms