Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM11Q96F44 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM11Q96F44 RNU1-49P-201ENST00000363468 159 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 Y_RNA.193-201ENST00000363979 102 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM11Q96F44 ATP5HP3-201ENST00000396994 486 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 AL359704.1-201ENST00000411586 781 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 AC245054.2-201ENST00000415639 319 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 RPS7P14-201ENST00000426405 583 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 AL445669.1-201ENST00000426743 755 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 RPEP4-201ENST00000437636 602 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 GAPDHP23-201ENST00000444823 993 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 CEACAMP4-201ENST00000457676 421 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 SNX18P24-201ENST00000505249 671 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 AC098799.3-201ENST00000506095 438 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 RFPL4AP3-201ENST00000515267 345 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AL049870.4-201ENST00000555741 486 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 AC006270.2-201ENST00000578523 652 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 GLYATL1P2-202ENST00000588046 902 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 BNIP3P4-201ENST00000604946 565 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AL137067.2-201ENST00000621202 131 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 AC091925.1-201ENST00000623204 462 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 AL683826.1-201ENST00000624104 627 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 CASC19-246ENST00000641625 1606 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM11Q96F44 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM11Q96F44 AC010928.1-201ENST00000592477 1447 ntBASIC6.56□□□□□ -1.36
TRIM11Q96F44 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM11Q96F44 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM11Q96F44 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM11Q96F44 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM11Q96F44 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM11Q96F44 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM11Q96F44 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM11Q96F44 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM11Q96F44 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM11Q96F44 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM11Q96F44 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM11Q96F44 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM11Q96F44 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM11Q96F44 Y_RNA.259-201ENST00000364619 101 ntBASIC6.55□□□□□ -1.36
TRIM11Q96F44 RNY4P34-201ENST00000364779 95 ntBASIC6.55□□□□□ -1.36
TRIM11Q96F44 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 OSTCP4-201ENST00000424397 449 ntBASIC6.55□□□□□ -1.36
TRIM11Q96F44 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 MTCYBP9-201ENST00000431021 303 ntBASIC6.55□□□□□ -1.36
TRIM11Q96F44 RPL5P25-201ENST00000441148 775 ntBASIC6.55□□□□□ -1.36
TRIM11Q96F44 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 PPIAP32-201ENST00000449940 472 ntBASIC6.55□□□□□ -1.36
TRIM11Q96F44 RPL23AP60-201ENST00000450011 454 ntBASIC6.55□□□□□ -1.36
TRIM11Q96F44 AL590365.1-201ENST00000450788 243 ntBASIC6.55□□□□□ -1.36
TRIM11Q96F44 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 AC091564.1-201ENST00000464563 479 ntBASIC6.55□□□□□ -1.36
TRIM11Q96F44 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 MTND1P3-201ENST00000484956 952 ntBASIC6.55□□□□□ -1.36
TRIM11Q96F44 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM11Q96F44 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM11Q96F44 CDC42P3-201ENST00000518493 633 ntBASIC6.55□□□□□ -1.36
TRIM11Q96F44 RPL21P5-201ENST00000554662 472 ntBASIC6.55□□□□□ -1.36
TRIM11Q96F44 AC055876.1-202ENST00000567053 138 ntBASIC6.55□□□□□ -1.36
TRIM11Q96F44 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms