Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.81□□□□□ -1.48
SYNE4Q8N205 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.81□□□□□ -1.48
SYNE4Q8N205 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE4Q8N205 AC016839.1-201ENST00000578162 867 ntBASIC5.81□□□□□ -1.48
SYNE4Q8N205 AC124283.4-201ENST00000581815 456 ntBASIC5.81□□□□□ -1.48
SYNE4Q8N205 AC011477.5-201ENST00000586571 259 ntBASIC5.81□□□□□ -1.48
SYNE4Q8N205 OR2AS2P-201ENST00000606902 342 ntBASIC5.81□□□□□ -1.48
SYNE4Q8N205 RNA5SP439-201ENST00000617595 124 ntBASIC5.81□□□□□ -1.48
SYNE4Q8N205 BX005214.3-202ENST00000619809 325 ntBASIC5.81□□□□□ -1.48
SYNE4Q8N205 AC067852.7-201ENST00000623270 535 ntBASIC5.81□□□□□ -1.48
SYNE4Q8N205 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNE4Q8N205 AC098679.5-201ENST00000624394 571 ntBASIC5.81□□□□□ -1.48
SYNE4Q8N205 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE4Q8N205 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE4Q8N205 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE4Q8N205 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE4Q8N205 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SYNE4Q8N205 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE4Q8N205 GVINP1-202ENST00000531871 7271 ntBASIC5.81□□□□□ -1.48
SYNE4Q8N205 AC025031.4-201ENST00000621248 3271 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE4Q8N205 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 ZNF137P-201ENST00000456718 1920 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 BMS1P3-201ENST00000372011 932 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 RNU6-636P-201ENST00000384598 107 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 NPM1P38-201ENST00000403835 865 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 MFSD13B-201ENST00000420133 1290 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 PTP4A1P5-201ENST00000420305 455 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 E2F6P2-201ENST00000420708 748 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 AL358176.3-201ENST00000420757 454 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 RPS3AP44-201ENST00000425466 790 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 MTCO1P43-201ENST00000431831 488 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 NPM1P49-201ENST00000448027 714 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 NUTF2P3-201ENST00000448540 384 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 snoU13.22-201ENST00000459428 104 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 AC011037.1-201ENST00000483964 558 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 GOLGA5P1-201ENST00000507317 980 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 AC020593.1-201ENST00000507399 299 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 AC093755.1-201ENST00000512950 1023 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 IGLVIV-65-201ENST00000517313 360 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 AP000926.4-201ENST00000527351 454 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 CYCSP29-201ENST00000533731 318 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 HMGN2P47-201ENST00000559378 272 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 AC080078.2-201ENST00000603766 501 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 ARF4P1-201ENST00000605447 541 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 AL133243.1-201ENST00000614487 366 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 ZYXP1-201ENST00000617638 118 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 AP005019.3-201ENST00000620418 560 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE4Q8N205 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE4Q8N205 UGT2B26P-201ENST00000508672 1613 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 AL356473.1-201ENST00000406203 1408 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 VN2R3P-201ENST00000422626 1412 ntBASIC5.8□□□□□ -1.48
SYNE4Q8N205 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SYNE4Q8N205 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SYNE4Q8N205 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE4Q8N205 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE4Q8N205 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE4Q8N205 ZNF90P1-201ENST00000480493 1951 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 ELL2P3-201ENST00000457883 1602 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE4Q8N205 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 RNU6-623P-201ENST00000363143 105 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE4Q8N205 Y_RNA.472-201ENST00000384322 102 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 SNORA70C-201ENST00000384538 135 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 RNA5SP171-201ENST00000391071 115 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 AL121978.1-201ENST00000402778 359 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 AL356131.1-201ENST00000405826 414 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 RNU4-72P-201ENST00000410754 173 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE4Q8N205 RAD23BP1-201ENST00000421404 1227 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 AP001324.1-201ENST00000428553 399 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 NPM1P13-201ENST00000452663 865 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 RPL21P131-201ENST00000497298 483 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNE4Q8N205 SNORA3.4-201ENST00000515969 96 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNE4Q8N205 MTCO1P49-201ENST00000523429 802 ntBASIC5.79□□□□□ -1.48
SYNE4Q8N205 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms