Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 OR2AM1P-201ENST00000422137 422 ntBASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 RPL21P66-201ENST00000426566 466 ntBASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 UBE2V1P6-201ENST00000430840 422 ntBASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AC044797.1-201ENST00000445744 679 ntBASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 RNA5SP392-201ENST00000516905 112 ntBASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AP003355.1-201ENST00000518956 587 ntBASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 OR4C2P-201ENST00000530855 1064 ntBASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 LSM6P2-201ENST00000552208 177 ntBASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 ZNF971P-201ENST00000562068 1249 ntBASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 MIR4644-201ENST00000579929 84 ntBASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AC005377.1-201ENST00000605126 456 ntBASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 MIR8080-201ENST00000622224 89 ntBASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
HMGB1P1B2RPK0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
HMGB1P1B2RPK0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HMGB1P1B2RPK0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HMGB1P1B2RPK0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HMGB1P1B2RPK0 AC008758.3-201ENST00000507003 1829 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 SAGE4P-201ENST00000442271 3381 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 RNA5SP46-201ENST00000362370 120 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 SNORA70.10-201ENST00000384515 134 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AL603865.2-201ENST00000401679 213 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 HMGB3P19-201ENST00000403971 560 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 RNA5SP231-201ENST00000410496 138 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 B3GNT2P1-201ENST00000434960 952 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 PPIAP17-201ENST00000438507 471 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AL662791.1-201ENST00000441992 928 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 ATP5G1P3-201ENST00000463301 410 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 RN7SL51P-201ENST00000468230 285 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 RPS17P11-201ENST00000474297 293 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 RPL31P13-201ENST00000484151 370 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AC068305.1-201ENST00000497406 726 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 GTF2F2P1-201ENST00000511083 675 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AP003385.6-201ENST00000531603 374 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 RBM7-208ENST00000545678 867 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AC120053.1-201ENST00000607706 736 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 SNX18P1Y-201ENST00000616231 511 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AC008725.1-201ENST00000605123 2263 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AC090337.1-201ENST00000579651 2074 ntBASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB1P1B2RPK0 AC139713.2-214ENST00000642059 1811 ntBASIC4.95□□□□□ -1.62
HMGB1P1B2RPK0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGB1P1B2RPK0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGB1P1B2RPK0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB1P1B2RPK0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB1P1B2RPK0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB1P1B2RPK0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HMGB1P1B2RPK0 HSPD1P14-201ENST00000432666 1618 ntBASIC4.95□□□□□ -1.62
HMGB1P1B2RPK0 RNU6-582P-201ENST00000362989 107 ntBASIC4.95□□□□□ -1.62
HMGB1P1B2RPK0 RNU1-130P-201ENST00000363930 160 ntBASIC4.95□□□□□ -1.62
HMGB1P1B2RPK0 RNU6-115P-201ENST00000364310 107 ntBASIC4.95□□□□□ -1.62
HMGB1P1B2RPK0 RNA5SP132-201ENST00000364725 118 ntBASIC4.95□□□□□ -1.62
HMGB1P1B2RPK0 RNA5SP235-201ENST00000365411 114 ntBASIC4.95□□□□□ -1.62
HMGB1P1B2RPK0 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms