Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC112498.1-201ENST00000444401 332 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 MTND2P8-201ENST00000450555 1025 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 RPL21P71-201ENST00000465598 459 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 RPL35AP15-201ENST00000468042 339 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 BX284632.1-201ENST00000478218 541 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 RN7SL826P-201ENST00000479724 288 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 RN7SL812P-201ENST00000493791 279 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 ATP1B1P1-201ENST00000509767 915 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AC021146.1-201ENST00000511202 716 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AC016550.3-201ENST00000515706 767 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AC104997.1-201ENST00000519761 717 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AC006064.5-201ENST00000541782 248 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 GNRHR2P1-201ENST00000555315 631 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AC009268.1-201ENST00000561352 1203 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 MIR3934-201ENST00000579806 107 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 VN1R79P-201ENST00000593540 513 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AC104662.1-201ENST00000604448 511 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AC015726.3-201ENST00000624501 418 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 IPO8P1-201ENST00000455509 3109 ntBASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.32□□□□□ -1.88
RBFOX3A6NFN3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC053481.2-202ENST00000582394 1500 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 RNU6-317P-201ENST00000384031 107 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 MIR550A3-201ENST00000390735 95 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 VN1R54P-201ENST00000435210 1049 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC006466.1-201ENST00000438721 289 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC114495.1-201ENST00000441274 436 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 RPL7P61-201ENST00000451721 751 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 MTCO3P16-201ENST00000454456 754 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 RPS23P1-201ENST00000491662 432 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC010374.1-201ENST00000503762 1237 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 GAPDHP56-201ENST00000506031 988 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AP001922.4-201ENST00000526967 290 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 OR4A2P-201ENST00000527276 913 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 GCSHP4-201ENST00000538792 439 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC091515.1-201ENST00000548110 679 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AL109766.1-201ENST00000555080 552 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC023158.1-201ENST00000561632 1025 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC021483.2-201ENST00000567415 758 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 MIR4644-201ENST00000579929 84 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AP001180.3-201ENST00000582221 145 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 MIR548Y-201ENST00000582739 110 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 EIF1P6-201ENST00000600054 334 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC083899.3-201ENST00000603413 594 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC005084.1-201ENST00000605160 304 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC090525.3-201ENST00000605601 189 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC012557.1-201ENST00000607115 611 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 MIR6891-201ENST00000618788 93 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC025125.1-201ENST00000624743 1922 ntBASIC3.31□□□□□ -1.88
RBFOX3A6NFN3 AC138393.1-206ENST00000540997 1886 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms