Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 AC068993.1-201ENST00000546724 589 ntBASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 AC087465.1-201ENST00000560574 245 ntBASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 AC013468.1-201ENST00000608680 598 ntBASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 AC007786.3-201ENST00000615154 596 ntBASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 MIR6133-201ENST00000617057 108 ntBASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 AC015908.5-201ENST00000623289 343 ntBASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.92□□□□□ -1.46
CTDP1Q9Y5B0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 NACA3P-201ENST00000359690 648 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 RNU6-225P-201ENST00000384613 103 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 ATP5F1P3-201ENST00000397213 657 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 RN7SKP216-201ENST00000411050 312 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 OR4K6P-201ENST00000416478 897 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 OR2AM1P-201ENST00000422137 422 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AL360081.1-201ENST00000428299 555 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AL353597.2-202ENST00000434901 373 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC093716.1-201ENST00000435923 377 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC112498.1-201ENST00000444401 332 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AL360221.1-201ENST00000445989 335 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC091180.1-201ENST00000462104 372 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 LINC00888-204ENST00000487386 421 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC025459.1-201ENST00000504072 156 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 RNU6-513P-201ENST00000516104 104 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 RPL12P22-201ENST00000519073 490 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC136777.2-201ENST00000522979 358 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 CR383656.6-201ENST00000550518 394 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC087783.2-201ENST00000605070 562 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC122133.1-201ENST00000613964 233 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC073569.3-201ENST00000619055 682 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC091965.5-201ENST00000624785 342 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AL392088.2-201ENST00000637607 285 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 ZNF663P-202ENST00000641770 1131 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC017007.4-201ENST00000503353 1352 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC096656.1-201ENST00000623826 1364 ntBASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
CTDP1Q9Y5B0 AC006042.3-201ENST00000454684 1469 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 RN7SKP95-201ENST00000362860 303 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 RNU1-87P-201ENST00000363727 170 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 RNA5SP428-201ENST00000365129 132 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 RN7SKP247-201ENST00000411094 308 ntBASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.9□□□□□ -1.46
CTDP1Q9Y5B0 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms